| Id Trinity | TRINITY_DN49181_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_290712 |
| Sequence | CATGAATGTAGAAATTAGGTTTTAAGGTATTAGACTAATTTGTTGTTTGAAATGCAGAATCGATGTGGCAATTGAAGCTCAGTAGCATCGATTCGTACCC GGAACGAGTTGGAGCTCCGAATTGTGTGTATTATATGAGAACTGGGTTCTGTGGATATGGTGGGAGGTGTCGTTATAATCATCCTCGTGATCGTGCCGCG GTTGCTGCAGCTGTAAGAGCTACAGGGGAGTACCCAGAACGAGTAGGGGAACCTCCATGTCAGTATTATTTAAAAACTGGAACATGTAAATTTGGTGCAT CATGTAAATTCCACCATCCCAAACATGGAGGTGGATCTTTAAGCCAAGCTCCACTAAATATTTATGGATGCCCGTTAAGGCCGGGTGAGAAGGAATGCTC CTACTATTTGAAAACAGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCACCCTCAACCTGCTGACACATCTTTGTCAGCTTCTGCACCTCAATTT TATCAACAGGCGCAGTCTCCGACGGTTCCTCTGCCTGACCAGTATGGAGGAGCATCCACAAGCTTGAGGGTAGCTAGGCCTCCTATATTACCTGGTTCAT ATATACAAGGAGCTTATGGTCCTGTACTTCTTTCCCCAGGCGTTGTTCCATTTCCTGGATGGAGTCCTTATTCGGCACCTGTAAGTCCTGTCTTATCTCC TGGTGCTCAACCTGCTGTTGGGGCTACTTCTCTGTATGGAGTGACCCAGTTGAATTCATCCACATCAGCTTTTGCTAGACCATATACTCCACTGCCCTCT TCTTCTGGTCCATCAGGAAACAACCAGAAGGAGCAGGTATTTCCTGAAAGGCCAGGTGAACCTGAATGCCAATATTTTCTGAGAACAGGGGACTGTAAAT TTGGATTAGCTTGTCGATTTCATCATCCTAGGGACCGGGTTGTAGCACGGCCACTTCTAAACCCCATTGGTCTCCCTCTTCGTCCGGGGGTACAACCTTG TGCATTTTATTTGCAAAACAATAATTGTAAGTTTGGCTCTGCATGCAAATTTGACCATCCTTGGGGGCCTGTGAGACACAGTGCATCAACATCTTCCTTG ATTGATATGCCAGTTACACCTTATCCAGTTGCTTCTTTGCTCTCTACCCTGGCTCCTTCACTAACATCTTCAGCGCTTCGACCCGAATCACTTTCAGGGT CCAAACTGGAATCCTTTACAACCAGAATATAAAGCCTTCTTGTGGAAGTAATTCCCCTACATCAGTTGAATTTTTTATCAAGGTGGATCTGTCTCACTAT TTGTATCTGATGTGCAACTCTCAAGTCAGATTTCTTCCCCTCTAAGCAGTATCTGAAGCAGCAGAGAAAGTGGTGAGATACATTGATCTGGTTAATTAAC TAGAAAATGTTCCTCCAAATCACCACTGGTTGTGATTTTATGTGCCACCTTTGTTTAGTAGTGAATATTTAGTAGCAACTGAGCCCCTTCCTCACTGTGT ATAAATTCACCATCCTATATTGTTTAGAGTCTACACTAGTTCATTCTCATTATGCTCATATTGTCTAGTTATATATTACATTATCCAGAATAAGCTTCAA TGGAAAACTGTATATGGTCTTTCCTTCTGTTTGACAGTATTATTTCTTGATTTATGGTCTTTTGGGAATAGGTTGGATTAACTTTCATGGTATCACTATT CATACATTATTTATGGATCAATATTTTTGTAAGATTTTTGAAGTCTTATGAGTGACGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_167181; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_290712
| Blastp | Zinc finger CCCH domain-containing protein 32 from Arabidopsis with 73.42% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 32 from Arabidopsis with 73.28% of identity |
| Eggnog | zinc finger(COG5063) |
| Kegg | Link to kegg annotations (AT2G47850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421554.1) |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |