| Id Trinity | TRINITY_DN49184_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_290688 |
| Sequence | TGAAAAATGGCAATGTCGTAATAGTCAAAGCAGAAGAAGGGTAGTAACGTAGTTGTGTTTAGATGGAGCAAGAAGAACAGAAGCAATAGCGACAAACAAC ACCGTACCCAAAACTGTGATCGATTAAGACACAGTTCCAAATTCTAAGCAATGCCTGTCATTACCTGAATCTTATGTTCTTCCTTTTCGGAGTTTTTCAC ATTCTTCTGTACTATGGTAATGCTATTTCTGAGAACATTTTGTAGTGGAGGGCTTGATCCTGCTTGAAATTTTGGATTTTTCACATTATTCTGTTTTTCT TTGTCTTGCAAAAGTGTCAAAAGCTTAGGATGTGAATGCTATTATTTGCATAATCAAAGGTTGATTTCTAGAGAATATGGCTTCTTCATGGGATCATTTT GGGGAGGTTGCGAATGTGGCCCAGCTAACGGGCATAGATGCTGTGAGATTAATTGGGATGATCGTAAAAGCTGCGAGTACGGCACGGATGCACAAGAAGA ACTGCAGGCAGTTTGCAAAGCATCTGAAGTTGATTGGGAACTTGTTGGAGCAACTCAAGATCTCAGAGCTTAAGAGGTACCCTGAAACACGGGAACCTCT GGAGCAGCTTGAAGATGCCTTGAGAAGGTCTTATATTTTGGTTAATAGTTGTCAGGATCGGAGCTATCTTTATTTGCTTGCCATGGGCTGGAACATTGTT TATCAATTCCGGAAAGCTCAGAATGAAATTGACCGATACCTACGCCTTGTACCTCTCATTACTCTAGTCGACAATGCTCGAGTCAGGGTATCTTTTATCC CTTCACTGTACTCGTTATCAGCTATCCATTGTTGTGAATGGATTTTCAGTTTTGTTTGAACAGGAAACTAATAAAGAGGAGAAAATTCTGTAGTTTTACT CGTTGGAATCTTTCAACATCTCGGTTGATATTACTTATTTGTGTCTTTGCTAGTTTGCAATTAATTTAACACTGCCGGCTAGTACTATATACAATTCCTA GGGTAGAGGGATTTAAGATCTCATTTGATGTATTGCTTCCGGATACAACTCACGTAGGTCCCTTCACTCCCTTGGAAAAATCAATAAGCAGGAGATCAAC TTGTGGTTGATTTTCAACATTATTTGAATGTTAATTGAAGCTTCTTCAGAAGTTTATTGAGCAATGTTAGTATGAGTAAATCCTGCATTAAAATGAGGAT TGCTTCATTTGAGTGATTCCTAACTCTTGATGAGAGGAATCAAAATGGCCTAAACTTGTTATCCACCAAATACAACTTGTTCTGCATGTGAAGATTACGG TCCGATGCTTGTAAGTTGCATATGCTGAACTTGTAAAGCCATCTAACCACATTATGCGTTTGATATAGATACAATCCCGGCAATTTGAGCGGTGCTCGAA TGGATTAATTCAGAGTCCTTTTTCAATGGGATCCGAGCGACTACTCTTGAAAATTGTGATAGATCATCTCTGCCCTAAAGTATTGGCACAACTATGATGC ATTAATTCAGAGTCCTTTTTCGAATGCTTTGTTTCTCACCACATGCTATTAAGGACACTAGGATAACATAGCATTTGATGTAATTTAGAACGCAAACCCA TTAGTTTATATCAAGCTATTAATCTACTCCCTGTTCATTTTCGAAATGATTGTGAGTGAGTGACGGTGTTGCACAAGCGACGGCATTATTCTTTTCAATC AATCGGAATTTTCAAATTTTCCATATCTTTCTACAGACTTTGATCTGCTTCATATTGCAACCTTGTTAGTAGCATATATGTTTGTAATTTAGTCTGAATA CTATAAGTGAACAATCTATTGTGTTCTTTAAATCAGGAAAGATTTGAAGTTATTGAAAAAGATCAATGTGAGTACACATTGGATGATGATGACCAAAAGA TGCAGACTGTTATTTTAAAACCCGAGCCTGACAAAGATGATGCTGTAGTGCTGAAGAAAACTCTTTCGTGTTCTTACCCCAACTTTTCTTTCACTGAAGC ACTTAAAAAAGAAAATGAGAAGCTTCAACTTGAGCTACGACGTTCACAAGCAAATATGGATATACAAGAGTGTGAGTTCATTCAACGTTTGTTAGATGTC ACGGAAGTTGCAGCTTGTTCTCTTCCAGAGAAGTTTTCACCAGAAAAAACTTGTAAGAAAGTAGAGAACAGTAACTTTGCTTATTCTGATGCCAATGATG GAAAGGGTCATTCATCTGATATGAAAGTCCATAAAAAAAGCGACAATGTTTTAGCAACAGGAATGTCAGTTTCAGAAAAGGAAATGTCAACCAGAGGCTC ATATCAGCAGGAAGATTGGCATACGGATTTGCTCGCATGTTGTTCTGAACCTTATCTCTGTATGCTCTCTCCGGTTGTAAATTTGATTTCCTTTCGGTTT AGTCAGCTATAGTATAATAGTTTCTTTCTTCACTACAGGGTATTGCATGTATATTTTGGTTCACTATATCTGTAGCCTACTAGCCTTATTAACCAAAATG CTTTTCCATTTTTACTTTTCCATTAAAGCAGTAGTCCAACAAAACCCCGAATTCGCATATCTGTTAATTCACATATCTGTAGTTTAATTTTTGACGCATA TTCTCCCCCGTTATAGTGAGGTTTATTCTTTATCCTTGTACATAAACTATCTTATAGTCAGCATCCTTCTTTGGTAGAAACATTTCTTTTTCTTTTTCCG TTTCGGGGTGACTTATAGGCATTTCGGATCTACTAAGTTGAAAGATTCTAGTTTGAGTTTCTCTTCGCTTAAAGGGGTAAGGCTGTTGTTACTTGTTAGA CGCTTAAATGGATGAAATATACAGCTTCGTGAGAATCAATAGGAATGGTTAGGAAATAGGATAGAGGTTCTTGCATGATGTATGTTGGCGGCACCTTTTT TTCCGTGAACCTTGAATAAAATTAGAAGTTGGTTGTGGTAACTTTTACAGCTGCATTCATAAGTAGATTATTTGCTTCGCAGGTATAAAGACATTCTTCT ATCCTTGTGGAACACTTTCCAAGATTGCTACTATTGCAACTAACAGGCCAATATCTTCTGCAGAAATATGTAATGAATTGATGGCATATTCATTAGTCTT ATCTTGCTGTTGCTATACTTGCTGTATAAGGAGGAAGCTTCGGAAGATGTTGAACATCACGGGGGGCTATGTCGATGATTTTCTTTCTCATTTGATGTGC TGCTGCTGCGCCCTTGTGCAAGAATGGAGAGAAGTAGAAATTCGCGGGGTTTACGATCCTAACAAGACCAATACAAGTCCTCCACCCTTACAATACATGG AGTCTTAAATAAAATTAAGAAAATGAGATTGTTATTTGGTTGTTTAGGGCTTTGAATACTATATGGAAAAGAGGCAATAAGCTATTGGAACAATCACATG AAGCCAAGAACTATGTATGTATTATGAGTCTCACTTTGCTTGGCTTTAGTTGCCTATATGTAAAGTAGGTTTCTTTAACATGTATCCAAAAAGTCACTTT AGCTTTAGCTAATAATGCATCATTATTATGTTGTCTTTTTTTTGGGCCCATTTTAGAAAATGATACATGTCGCGACCCGATTTTTGATTGGAAGATCGGC TTTGCGACTTAGGAAGATGCGAACTCGATTTTGACATCTCCTAGTTGAATTGGAGTCGCCGCTTTATGAGTCACACTTGCATATGAACTCGCTTCAACCC GTTTGGTGAAATAGTCAATAATAGCAAGGATGAAATGATGTCCATTGGAAGCTTTAGGTTCGATGGGTCCAATAACATCCATACCCCACATAGAAAATGG TCATGGTGCAGATAAAACATTTAGCGAGTTGGGTGGTGCATTGATGTTGTCGGCATATATATGGCATTGTGACGTTTATGCACATGCTCACAACAATCAT TCTCTATCGTTAACCATAAATAACATGCCCTCATAATTTTTCGAGCTATTGCATGTCCACTTGCATGAGTTCCAAATGTACTTTTGTGCACTTCTTGGAT GATTCTCTATGCTTCTTTGGCTTTTACGCACCTTAGCAACACCATATCATGGTTTTGCTTGTATAACACATTCTCATTCATGAACAAACCGATAGCTAGC CTCCTATAGTCCTTTTGTCATTTCATGTGGCATCAGGAGGATATTCCTTCCTTTTGAGAGATATCATTTTATCACAGTAGCAAGGTTTTCCATCATTTCC ATGAGAAAAATGTCCTAAAATTGTGTAATACATATATTGAAATTTTTTAACATAATTTTCTTTTGTATAACTAATAGTATTCTTATCTTGTAGATCAGGA ACTAATTTTTTTTTGTATGTGGTTGTCTCACCCCAAAACCAAAGGTACCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_167200; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_290688
| Blastp | Protein MID1-COMPLEMENTING ACTIVITY 1 from Arabidopsis with 50% of identity |
|---|---|
| Blastx | Protein MID1-COMPLEMENTING ACTIVITY 1 from Arabidopsis with 81.43% of identity |
| Eggnog | Mid1-complementing activity(ENOG410YER5) |
| Kegg | Link to kegg annotations (AT4G35920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423500.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |