Ll_transcript_292205

• Id Trinity: TRINITY_DN49186_c1_g1_i3
• Name Transcript: Ll_transcript_292205
• Sequence: GAGGAGAATAAGGTAGAACAGAATGCGGGAGAGGAGGAGAATAAGGTAGAACAGAATGCGGGAGAGGAGGAGAATAAGGTAGAACAGAAAGCGGGAGAGG AGCAGAATAAGGTAGAAGAGAACGAGAGGGAGAAGGAAGATGAGGAAAAGGGGGACAAAAAGCAGGAATTGGATGTTTGTATTGCTGACAATGACAATCA TGATAAAACTGGAATTGATGATAAGAATGCGCATGAATTACCTAAAGCTGATGATAATAAAGGAGAAATCAACAATGGTAACACTATAGTAAATGCAGCT GATGAGCTAGCAGACATGAAACCGTGCTGCAAAACAGATGCACCAACATGTGGTTTGAAAGACAAAGTGGAGGAGAAGTCTATTGATAAGTTGATTGAAG AAGAACTCAAGGAATTGGGAGACAAGACTAAGAGACGCTTTATTAAGCTTGATTCAGGCTGTAATGGTGTGGTATTCGTTCAAATGCGAAGGAAAGATGG AGAAAATGGCCCCAAAGATATAGCTCAACACATAGTGACATCAGCTGCTGCAACAAGGAAACACATGTCAAGGTTTATTTTGAGAATTTTGCCAATTGAG GCCACATGTTATGCTTCAAAGGAGGAAATTTCAAAAGCAATGCAGCCTCTTGTGGAACGTTACTTTCCTTCAGAAACTCAAAATCCACAGAAGTTTGCTG TACTGTATGAAGCTCGTGCTAATACTGGCATCGATAAGATGGAGATCATAGATGCAGTGGCAAAATCAATTCCTGGACCCCATAAAGTTGATCTCAGTAA TCCTGATAAAACCATAGTAGTTGAAATTGCTAGGGTAAGAAAAGCCACACTCTGACTGAAACTTTGTACTCATCAAGTCATTTTTGTTTTCTAGCAGCAT AAACTTTGTAAAGTTCTTCTTCCGGTGTGCCATATTATTTTTCTGAAATATTTATCTTTCCAAATTGAGTGAGCAAGCTTCACACAAAGGTAAGGTTGTC TGCCCTGTAACCTAGAGGTCATGAGTTCAAATCCTGTAAATAACATCCAGTTTTCATAGACTCCACTAGTTGTGAGTCTAGTGCCATGTGCTACCCTTTT ATCTCTCTTTCCAAATTGACGACTTATTGTTATATTTATTACTTGGTCGTGCTACCTAGTTGTATGCTTCGCGTTGCTGTGAAATCTAAACCCTTCATTA AAATGGCTTTCTTTAAAGTTATGTAGAAGTTCATGCCTTCTTTAAACCGTCACTCGATGTTTAGAACTAATGCATCCTCTTTCTCTTTGACAGACTGTAT GCATGCTCGGAGTCATTGATAAATATAAGGAACTTTCGAAGTACAATCTGAGGCAGTTAACATCACAGAAAGTCTGAGCCTTTTCCTTACAAGCTTTTAT GCCTGTGGTTAAGCAGAATTGTACTAGGCTAACTTATTTAAATGTTTTTTTGCTAAATGTGTTCTAGGGTAACTGCATGATACTATGGTCTTTGACAATT GTCTTTTTAAAGTGCTAGACTCAATGCTGTTTTTTGTTAAATCATCTGATACCGGATACGTTAAGGGCAACAAAGCTTTTCATATCCAGTTATTTAAACA GAATGTTGTTTCTAGATTTTCTCAAACTCATTCTTTTCTAATTGAGCC
• Tissue: pods
• Gene name: LI_gene_167214;
• Additional information: details;

Expression of Ll_transcript_292205

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.7
• PS2: 0.3
• PS3: 0.2
• PW1: 0.2
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292205

• Blastp: THUMP domain-containing protein 1 from Mus with 35.1% of identity
• Blastx: THUMP domain-containing protein 1 from Bos with 34.42% of identity
• Eggnog: THUMP domain-containing protein(COG1818)
• Kegg: Link to kegg annotations (233802)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421955.1)
• Pfam: THUMP domain (PF02926.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;