| Id Trinity | TRINITY_DN49194_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_292027 |
| Sequence | CAATCACATTCTATAAACATCCATCCACTTCCCAAGAGAGTTGAAATGGGCCTTATGAATACGTGAGATTATTTACAAGACCCAAAACAAATTACTTATA AAGGAGGGGATCAACTCGATATAGAAGAATGATAGCAAAAAGAAAAGTGTGGTTTGGTGAGTAAGTGGAGGACAAAAACGGAATTACGAAAAACTGCTGA ATCCAGTGTACTCATCCTCACATATACTATCCATGCAACTCTTCTCTCATTGGCTCTTTTTATTGCTTATTCAACCCAATCCGATAATCCACCACCCTCT CTCTCTATTCGTCATTTTCCAATCCAAGAATTTTGCGACTAATTAATGGCTTCAACGATTCCTAATGCATCTTTTACTATAAAGAAGTCTTCTTTTTTAG ATGGGAATGGTTATGTTAGTGTTTCACCATTGCCCACGAATTTAAAGTTCATGTGTTCATCAAATTCTCGCCCAAGTTCACACCTTTATGCAGTTAGAGC AATCAATTCTCAAAATGGTTCTGGCTCTGTTCAGAAGTTAGGCCTCACTGATGCTCAATCTGAAGCCGCCGTTGTCGCCGGAAATGTGCCTCACGCGCCT CCTGTTCCGCCCACACCGGCTGCCCCTATTGGAACCCCGGTGGTTCCTTCACTTCTGCTTCCCAGGCGTCCTCGTCGTAATCGGAGGTCACCAGTACTTC GAGAAGCATTTCAAGAAACAAGTTTGTCACCTGCAAATTTTGTTTATCCGCTTTTCATTCATGAAGGTGAGGAGGACACACCAATTGGGGCTATGCCTGG ATGCTATAGGCTTGGATGGAGACATGGACTCGTGGAAGAGGTTGCGAAGGCACGGGATGTTGGTGTTAATAGTATTGTACTCTTCCCCAAAGTCCCAGAT GCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGAGAATGGTTTAGTTCCTCGAACAATACGTTTGCTCAAGGATAAGTACCCTGACCTTGTTATCT ATACAGATGTGGCGTTAGATCCTTATTCGTCAGATGGGCATGATGGTATAGTTAGAGAAGATGGTAAGTTTTTGTTCCTTTTACTATAAAGTTAGAAACC TTTTCAGAAAATGCAAAAGTATAGGCAGGTAGAAGCATAGGAAAATGAGCAATTCTGCATGATTTGAACTTTTCTTGAAGAAAATGCTCTTTCTTAGTTA TAATCAATGAAGTACTAATTACATTGTATATCCTTGATATATTATAGGAGTTATTATGAATGATGAGACTGTTCATCAGTTATGTAAACAAGCTGTAGCC CAGGTAATAGGACTGCTGTCTTATATGTAAATTTTCAATTATAGACTGTTACCCATTGTTAATTTATTCTGACTTTCTGATTACATTTGTCATCTCCCCC AAACCTTCATTAATCTCTAAACGAGTTTCACTTGTGTACAATTAAATTTTGATTTGTGTAATGGGAGTGAACACAGTATCACAATGTTCCGAAAAGAAAC AGGAATAAACCAATGCTCAATCGTAGTTATCAACAAGTAACGTTTGCCAAAACTTTCAAGGAGGTTTATGGTTGAGCATTGTTATCTGAGGGTTTCAGCA TATAATTTTAACTTTCTATCTGTGACCTCACTAACTTCTTTTATGTTTTGGTTTAACATGTTTTTCTTCATTGATTTTAAAAAAGGCCCGAGCTGGAGCA GATGTTGTTAGTCCTAGTGATATGATGGATGGTAGAGTGGGAGCAATACGAGCAGCTCTAGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCTTATA CAGCAAAGTAATTACTAGCCATTTTCTTTTTCCTTATCTCATTTTCTGTGTATCCCATGCATTGGAAATTGCTGAAGGTTTATCCTGTTATGGAAATGTA CTTATCAATGGCGGAAAGGCCAGTCTGACTGGTTGAATGGTGAACCAGACCAGCTAGCTCATGCTATTTAAACCATTGACTTGAAAACGGAATTCAGATC GTGGAACTGACCATGAACCGGTCAAACTGTGGAGTTCACTATTTTGAACTGGTTCATTTCAATTTTGTAAATGGCAAGGAGTTACTTGTAACAATTTTAT AAAATTGATTACAAGTAATAATTTTGTTCATTTCAATTTTGAACCTGCATGAGAAATCACATACTGTTAGCAAGATGGATTGGTGGATGTTGTTCTTAGC TTCACTGACCTCTTTTTTTGTCTGGTATATAAGTTTTTGGTCCTAAACCATGCCATTTATCTTTTACTAAAAGGTATGCAAGCTCATTTTATGGTCCATT TAGAGAAGCACTGGAGTCAAACCCCCGTTTCGGAGACAAGAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACTGAGCTGCGGGAAGAT GAATCTGAAGGGGCTGATATTCTCTTGGTGAAACCCGGTCTTCCATATTTGGATATCATACGGCTGCTCAGGGATAATTCTCCTTTGCCTGTTGCAGCAT ATCAGGTTTCTGGTGAATACTCAATGATAAAAGCTGGTGGTGCTCTTAAAATGATTGACGAAGAAAAGGTTATGATGGAGTCACTATTGTGCCTCCGAAG GGCTGGTGCTGACATCATCCTTACGTATTTTGCTCTACAAGCAGCAAGATCTTTGTCCGGAGAGAAGAGGTAAGATTTTCTTACATTATGTAGGGCGTTG TTCATCGTAGAAGGCCGAAGAGCTCAAAGTATTTCACCAGTATGAGGGCTTTAGAAAATGTGCTGGATTTTTTTGGAAATGCTTTGCATGTCAATTGTCA ACCAGTTTGTTGTATTAAATAAGAGAATGTAGTCACCTGAAGAATATGGTTTTTTAGTGGAAGTATTTGGTACTGAAATTAAGTGTATCTTTGGAACTAG GTGCTCATATTCTGTCTGCTTTCTCTTTCCATAGATAATGTAATTTATGTTGTAAAACATATGTTAAATTGGAGGATATGGTTGATATATGGTTTTCTTG AGTTGACATTGTGATTTCTTTCATGATATTTTTTTATGATCAATAAGCAAACTCAAACAAAATGAGATAAAGGGGTAGGAATTGAATCAAATAGGCACAA TCCTTGAGTGGCCTTCATTAGCTAGGAAATTAACACACCTATTAGTTTCACATAGGGCACTAGCATGTTGCAGTGATATGCCAATAGCATTTTCTTAATA GGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_167288; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292027
| Blastp | Delta-aminolevulinic acid dehydratase 1, chloroplastic from Arabidopsis with 68.44% of identity |
|---|---|
| Blastx | Delta-aminolevulinic acid dehydratase, chloroplastic from Pisum with 93.48% of identity |
| Eggnog | delta-aminolevulinic acid dehydratase(COG0113) |
| Kegg | Link to kegg annotations (AT1G69740) |
| CantataDB | Link to cantataDB annotations (CNT0001653) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417073.1) |
| Pfam | Delta-aminolevulinic acid dehydratase (PF00490.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |