Id Trinity | TRINITY_DN49194_c0_g1_i18 |
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Name Transcript | Ll_transcript_292033 |
Sequence | CAATCACATTCTATAAACATCCATCCACTTCCCAAGAGAGTTGAAATGGGCCTTATGAATACGTGAGATTATTTACAAGACCCAAAACAAATTACTTATA AAGGAGGGGATCAACTCGATATAGAAGAATGATAGCAAAAAGAAAAGTGTGGTTTGGTGAGTAAGTGGAGGACAAAAACGGAATTACGAAAAACTGCTGA ATCCAGTGTACTCATCCTCACATATACTATCCATGCAACTCTTCTCTCATTGGCTCTTTTTATTGCTTATTCAACCCAATCCGATAATCCACCACCCTCT CTCTCTATTCGTCATTTTCCAATCCAAGGTAAGATTTTCGAAATCTCACCCTTACACTTTGTTCCCAAATATCAATTAAAGGGACTAATTGTTAGCAATA TCAACTAACTATTGTGAATTCTGAATACTGCAGAATTTTGCGACTAATTAATGGCTTCAACGATTCCTAATGCATCTTTTACTATAAAGAAGTCTTCTTT TTTAGATGGGAATGGTTATGTTAGTGTTTCACCATTGCCCACGAATTTAAAGTTCATGTGTTCATCAAATTCTCGCCCAAGTTCACACCTTTATGCAGTT AGAGCAATCAATTCTCAAAATGGTTCTGGCTCTGTTCAGAAGTTAGGCCTCACTGATGCTCAATCTGAAGCCGCCGTTGTCGCCGGAAATGTGCCTCACG CGCCTCCTGTTCCGCCCACACCGGCTGCCCCTATTGGAACCCCGGTGGTTCCTTCACTTCTGCTTCCCAGGCGTCCTCGTCGTAATCGGAGGTCACCAGT ACTTCGAGAAGCATTTCAAGAAACAAGTTTGTCACCTGCAAATTTTGTTTATCCGCTTTTCATTCATGAAGGTGAGGAGGACACACCAATTGGGGCTATG CCTGGATGCTATAGGCTTGGATGGAGACATGGACTCGTGGAAGAGGTTGCGAAGGCACGGGATGTTGGTGTTAATAGTATTGTACTCTTCCCCAAAGTCC CAGATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGAGAATGGTTTAGTTCCTCGAACAATACGTTTGCTCAAGGATAAGTACCCTGACCTTGT TATCTATACAGATGTGGCGTTAGATCCTTATTCGTCAGATGGGCATGATGGTATAGTTAGAGAAGATGGAGTTATTATGAATGATGAGACTGTTCATCAG TTATGTAAACAAGCTGTAGCCCAGGCCCGAGCTGGAGCAGATGTTGTTAGTCCTAGTGATATGATGGATGGTAGAGTGGGAGCAATACGAGCAGCTCTAG ATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCTTATACAGCAAAGTATGCAAGCTCATTTTATGGTCCATTTAGAGAAGCACTGGAGTCAAACCCCCG TTTCGGAGACAAGAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACTGAGCTGCGGGAAGATGAATCTGAAGGGGCTGATATTCTCTTG GTGAAACCCGGTCTTCCATATTTGGATATCATACGGCTGCTCAGGGATAATTCTCCTTTGCCTGTTGCAGCATATCAGGTTTTTGACTAGCTCTTTCTAG CACTAAGGCAACACATTTCTGATTAAAAGTTATTTTCCTGTCTCGACTTTGATCGCAATCCTTTTCAATTAATGGAGCAGGTTTCTGGTGAATACTCAAT GATAAAAGCTGGTGGTGCTCTTAAAATGATTGACGAAGAAAAGGTTATGATGGAGTCACTATTGTGCCTCCGAAGGGCTGGTGCTGACATCATCCTTACG TATTTTGCTCTACAAGCAGCAAGATCTTTGTCCGGAGAGAAGAGGTAAGATTTTCTTACATTATGTAGGGCGTTGTTCATCGTAGAAGGCCGAAGAGCTC AAAGTATTTCACCAGTATGAGGGCTTTAGAAAATGTGCTGGATTTTTTTGGAAATGCTTTGCATGTCAATTGTCAACCAGTTTGTTGTATTAAATAAGAG AATGTAGTCACCTGAAGAATATGGTTTTTTAGTGGAAGTATTTGGTACTGAAATTAAGTGTATCTTTGGAACTAGGTGCTCATATTCTGTCTGCTT BLAST |
Tissue | pods |
Gene name | LI_gene_167288; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292033
Blastp | Delta-aminolevulinic acid dehydratase 1, chloroplastic from Arabidopsis with 78.04% of identity |
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Blastx | Delta-aminolevulinic acid dehydratase, chloroplastic from Pisum with 85.8% of identity |
Eggnog | delta-aminolevulinic acid dehydratase(COG0113) |
Kegg | Link to kegg annotations (AT1G69740) |
CantataDB | Link to cantataDB annotations (CNT0001653) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417073.1) |
Pfam | Delta-aminolevulinic acid dehydratase (PF00490.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |