Ll_transcript_290771

• Id Trinity: TRINITY_DN49198_c4_g1_i24
• Name Transcript: Ll_transcript_290771
• Sequence: GTTTTGATTATGATGAGAGAGTTACCACTTATCACTTTACCAATAGAAGCTTTTATTGAAGGGGTTGTTGGAAATTACCATTACAAAAGCATAAGAACCA AACAAAACAAGAGTCTATGGCACCCCACAACTCATCAACACTTGAAGGTAAAATAAAACCTCACAAAAAAGCAAAAGGTGGGTCATGACTGTAAAATTCA ACTCATCACCTCAACCATGGAATAATACAAACATGTAAAGAGAAAACCCACACACCACACCATTCACTCACAGATCTCTCTGTACCAAAGTTTAAACTTT AAAGCTTTGCATCCAAAAAAAGACCATTCCTTTACCCTCTTTCAATGGCATGTTGTTTAAGATTTTGACTTTGAGTGAACCAGACAAAACCATTCCTCTC TGTTACATCTCTTTCTGCCACCTCTTCCTTTTGGTTTCTTCTGCTAAAGTAAATCACTCATCTTTCATTCCTTCCATTGACAACAAAATTCATTTTTTCA TAGTTCTTTTCTTTGGGTCTATCTGCATTTGTGTGTCTTCGTTTACTGAGAAAAAAATGAGGAAGAATGGATGGCAGTTACCATATCATCCTCTTCAGGT GGTGGCTGTTGCTGTATTTTTGGCTCTGGGGTTTGCTTTCTATGTGTTCTTTGCTCCTTTTGTTGGGAAAAAGATGTATCAGTATATTGTTATGGGCCTC TACACACCCCTGATTACTTGCGCCTTTGGACTATACATTTGGTGTGCAGCAGCTGATCCAGCCGATCCAGGGGTTTTTAAGTCCAAAAAGTACCTTAAAT TTCCAGACAAAAAAAAGCACGATGGACAGAAGGATTCTAAACCAGGAGGGGAATTGACTTCATCAATGCATGATGGAAACACTTCAACAGTTGGACCAAC ATCTGTGGATAAGGAAGCATTAGGCACAGAAACAAGTTTGAAAGATACCGCTATTGCAATAGAGAAGAAGACTGCATCGCCATCTCCTTCAATCTGCTTC CAATTGGTTTGCTATCCTTGTGCTTATATCTGCAGCTGTTCTAGTTCAAATGACGAATCTTCTGATCAACAAACAAGCGAAGATGGCATGTTCTATTGCA GTTTGTGTGAAGTTGAGGTCTTCAAGTACAGCAAGCACTGTAGAGTTTGTGATAAGTGTGTTGATCATTTTGATCATCACTGCAGATGGCTTAACAACTG CATTGGGAAGAAAAACTACCGACAATTTTTCGCCCTTATGGTTTCTGCTCTCCTCTTGCTTATTCTTCAATGGTTGACCGGGATACTTGTGCTTATCTGC TGTTTTGTTGAGAGGAAGCAATTTTCTATCGATATATCCGCCAAATTAGGAAGCAGTTTCTCTCTTGTTCCCTTTGTTATCGTGGTGGCTGTCTGCACCA TTTTGGCTATGATTGCCACCTTACCCCTTGCTCAGCTTTTCTTCTTTCATATTCTTCTCATAAAAAAGGGAATCAGCACATACGATTACATCATAGCTTT GAGGGAGCAGGACTTGGAGCAGCAAGGAATTGGAGGTCAGCAGAGCCCTCAAATGTCAACTGTTAGCTCGCTAACTGGATTGAGCAGTGCAAGCTCCTTT ACGAATTTCCATCGAGGTGCGTGGTGCACACCTCCACGCATGTTCCTTGAAGATCAGTTTGATGTGGTGCCCCCAGAAACAGCTTCCGTAAGTTCACTGG GAAAGAAATCAGTGAGAGATGAGTCAGTTAAGAAAAAGAATCATGCACCTGTCAAAATTAGTCCATGGGCATTGGCACGATTAAATGCAGAAGAGGTTTC CAAGGCTGCAGCAGAAGCAAGAAAAAAATCAAAAATTCTGCAGCCAGTGACAAGACATGACACACCTTTTCGGCTAGAACCAGACAACAACTCTGGAAGC AGTGGGCGACGAATGGTCCCAAGGATTGACAACAATAGAAGGCGTGCAAGCAAACGGGTTCGCATGCCTGCTGATTTGCCTATGGAGTCCCTGACAAGAT TTTCTGCAAATAATATTATTGATAAAGGCTTCAGTGCAACATCTAGTTTGGCAACTATGCAGGTTGAACCAAGGAGCGGATTTCAAACAATGCAAGCAGT GTCAAGTTCAGCTGGGATTATTGCTTCGTCACCTGAAAGCAGTTTAGACTCACCCGATATTCATCCATTCCGCGTGTCTTCAACAGATGCCGAAGAAGCA AGACGACTCGCTGGTCTTTCAGCTGCTGGTGCTGCTGCTCTTAAGGGAATCCCATTGTCAAGGTCCACTAGTGATGGATATGATGCCTCCGGCGGGGAAG ATAGTGACCGCGTTCCCACCAGGATTGTTCAGAGATCTACAAATTGGAGTAATCTTCTTTTCAGTGTTGATCGGGAAGAGATGGCTTTTGAGCCAAAATC ATCATCTAGCATGGTTCATAATAGAAAATTATGACCAACTTGGGTGTTAAAATAGACAACTACCTTGATGATTATTATATTGATGGGAATTGTTCATTCT TTGATTTGTGAGCTCAAAGGTTCTTCAACAACATCCCTTAACCCCTCACCTTGAGGTTAAGTTGATCTATTTATTTTTGAACCATTTTATTCCCGAGGAG CCGTAAGAGGTAAAAATCTCATGTACGGTTCTGTAATAGTGATCGAATTGAAAAACAACCAACCATCAACTATAACCCCGAAAGAACCAGATTCCGTAAA GTTTTGGAGGTAGGCTAAGTGGGAACTTGGAACCCCATGTACAAAGTTTTAGGCCACAGTAACTGATGAGGCTGAGCTTCCTTAATATATTTCTGTTTGT TATCCCTATTTTCTATTGATAAAACATTAATCATGCAAATTCCTTATGTATGGTCAATACTGAATGTTCATATTATTTACAATATTGAAAACTACATGCC CC
• Tissue: pods
• Gene name: LI_gene_167341;
• Additional information: details;

Expression of Ll_transcript_290771

FPKM

• PAB: 1.3
• PNAB: 13.7
• PS1: 8.2
• PS2: 5.8
• PS3: 6.5
• PW1: 8.6
• PW2: 5.7
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_290771

• Blastp: Probable protein S-acyltransferase 22 from Arabidopsis with 65.37% of identity
• Blastx: Probable protein S-acyltransferase 22 from Arabidopsis with 64.18% of identity
• Eggnog: Zinc finger, DHHC-type containing(COG5273)
• Kegg: Link to kegg annotations (AT1G69420)
• CantataDB: Link to cantataDB annotations (CNT0002609)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433396.1)
• Pfam: DHHC palmitoyltransferase (PF01529.19)
• Rfam: Intron_gpII (RF00029)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;