| Id Trinity | TRINITY_DN49206_c3_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_468418 |
| Sequence | TCAGGAGAATAGAGAACACCACAAATCGCCAAGTCACTTTCTGCAAGAGAAGAAATGGCCGTCTTAAGAAAGCATATGATTTATATGTGTTGTGTGATGC TGAAGTTGCTCTAATAGTCTTCTCTACAAGGGGCCGTCTCTATGAATATGCTAATAACAAGTACCTTCTTTCTAAATACACAAATATTTCAACCTTATAT ATCTTCTCAATTTTGTTTTTCAACACTTTTCTAAGAAACCCTTTTGAGATTTTTTTTTTATATTTGCTCCCAGATTTGTGCAAGTTAGGAGTGATTCTGC TGTTTTTTGGGTATTGGGTACTTGGATTTTTTTATCTCTAACAAATAGATCTTTCCAAGGATTTGAGCACAAAGAAGTGAAAGAACATTATATCATTTTT TTGTGATGTAGTTAAGATAGAGTTTTCCTCTTTCTATCTCTTATGCAACCAAGTTTCACTTGTCTTTCTTTACTTCTATTTTGGCCTTTTCCTTCTATGA GCTTTGAAGTTATCTTCTTTTTTTCTTTCACTCCCCTTTTTATTTTTTGTTTTCTGCTTATGATAATTTCCCTAGTTCTTGATTCATTGGATACATAGAT CTGGTGCAATAGATAGAAATAGAAGCACTAGCATAAGGTAAGGAATTGGTAAGTTATTCAGGCCTGTGAAATCAGCCACTACTTCTAACTCTAACTCTTC CATATTCTTGTTAATTTTCTGTTTCCTTTTTCCTCTTTCTGTTTTCCATTATTCTCCAACTCTTCCTCTTCTTCTCTCTCTCTTACACATATCTATATGG CTATAAGCTAAGAAGGCCTAAAGCAAAAGCTGTCATGCTTCAATAAGCTCCATCTTCTTTGACACTTCCTTAATAACACGTCAGTTATACACATCAAGAA AGCACAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_167397; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468418
| Blastp | Agamous-like MADS-box protein AGL11 from Arabidopsis with 64.63% of identity |
|---|---|
| Blastx | Agamous-like MADS-box protein AGL11 from Arabidopsis with 64.63% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (AT4G09960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016203283.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |