Id Trinity | TRINITY_DN49209_c5_g2_i3 |
---|---|
Name Transcript | Ll_transcript_466075 |
Sequence | GTTTTCGTATCAAGTCTTACTATAAATTGATGAATCGCGTACTAGTATAATGTATGTATATTAAAAAAGTACTACAAATTAAGTAACTATGCTTGCAGAA AATTGCTAAATTCAACAAAATTCTTAATTGTTCTAGTGAAATTCTTAATTTTTGCCATAAAGCAATTCATAATTGATTCTTTGAGAAAAAGAAAAACACA TTCTTTAATTTTCTTTGACCATAGATCATTTCTTTCCCCTCTCTTAATTTCAGTTTCTTTTGCTGTCATTCCATTCAATAATTCAATCAACCTTATATCT TAGCCTAAACAAAAACCACTTTTGCTCTCTCATACTATTGTCTGAAAACTCAATTCTGTATATCTCTCTTTCTACTACTTTCTGATATTCTTAGAAAACC ATTTCCTTTGTACATATATCAAATATAAAACACTGTGCATCATCATCAACAACCATGGCACCAAACAAATTTGCAACCATGTTACATAGAAACACAAACA AAGTCACACTTGTTCTTGTCTATGCAATCCTTGAATGGATTCTTATAATCCTTCTTCTCCTAAATTCACTTTTTTCATATCTCATCATAAAGTATGCTGA TTTCTTTGGCCTCAAAAGGCCTTGCATATGGTGCACAAGAATTGATCACATCATTGAGTCTAGGAAGAACAAAAATCCATGCAGAGATATTGTTTGTGAA GCTCATGCAAATGAGATTTCCAAGCTTGGTTTCTGCTCCAAGCATCTCAAGCTTGCTGAATCACAAGACATGTGTGAGGATTGTTCATCTTCATTATCTA AACCAGGTTATGTTAGTCTCTCTGAGAGTTTTGGTTTCTTTCCATGGATGAATCAAATAGGTATGAATATGACTAAGGATGGCGATGATGATGAACCTTT GAAGTGTTCTTGCTGTGGTGTTAACTTAGACAAGAGGCTATACCCTCCTTGTTTTTTGATCAAACCTTCTTCTAGGAACATTTTGGAGTACCCTCAGAAG CAGAATTTGATCACAGAAGGTGGGGTTGATGCAGAAATTGATGAATCAGATCACAGAAAATCAGATTTTTTGCTTGACCATCATGAAGATAAACATGATA GTGAAGAAAATAGGGGAATTAACATGGTGTTTGAGGTTGATCATGGAAGAGAAAAGGATGCAGGTGAGTGTTGTGGTTGTTCTGTGTGTGATTGTATCAA GAAAACTTTGGCTGATGAAATCTACAAGTTGGATTTGAGTGTAGAGAAAGGGATAGAAAAAATGAAAGATGAAACTTTTAATGTCCCTAAGGATGATGAT GATGACGAACCTTGTGAGCAAAACACTGCTAAGGTTGATTGCAATGGTGAGATGATTCAGGAAAATCCAAACATACATCTAGAATTCTTCATTCATGGTG ATGATTGCAGATTGGTACCTGTTGAATTGGTTGAATCTTCAGCCACAGAAAATGTGAACAAACATAGATATAAGGGGGAAGATGAAGATTTTATTCTTGA CTTTGATATGCATGCTGATGCAGAAGCTGATTCAGTTATTGAGAATTGGCACATATCTGGGGTTACTGACACAGAATTTTCATGTCAAGAGAATAAAGAA GAGTTTAATGTCAATGAGGTTGAATCAATTCAGTTAAGGAATCGAGAGAAATCCTCAGAATTTGAAGGAGAAGAAGAAAATTTGGAGCAGAGTTATCATG ACTTGAGATTTGCTCAAACAGATGAAGAATTGCATAAGGTTGATAATGTTCAAGGAAACATAGAAAGAGGAGGTGAACTATGTTCTGATTTTTCTCTAGT GTCAGAAGATGCAACACAAATGCAAGGTGAGGAGGAATTTGAAGCTGAGGTATCCATAGGGACTGAAATTCCGGATCAGGAGCAAGTGGATGAGTATCAA TGTCAAGATACACTTTTCGATAAAAATCAGAAAACACAAGATCTATCTACTAGCACAATCAGATTTCATGTCCAATATGATAGTGGCCAAGATAAAATTG AGGAGTTTTTAGAATTTAAAACCATGCCACTTGAAGTGAGAATGCCAACAATGAATAACCATTTGACATCAACATCTTTGGAGATTCATGATAATGAAGA AGAAAAGGTTCCTGATACACCAACTTCTGCGGAAAGTATGCATCAGCTACACAAAAAATTACTACTTCTAGAGAGGAAAGAATCGGGAACCGAAGATTCT TTCGATGGAAGTGTCGCGAGTGATTTAGAATGTGGTGAGGTAACAATGGAGAAGTTGAAATCAGCATTGAAATCTGAAAGGAAAGCTTTAAGTACTCTAT ATGCAGAACTAGAAGAAGAGAGAAGTGCATCTGCTATAGCAGCTAATCAAACAATGGCAATGATAAATCGGCTTCAAGAAGAGAAAGCATCAATGCAAAT GGAAGCTTTGCAGTATCAAAGAATGATGGATGAACAATCTGAGTATGATCAAGAGGCTTTGCAGATTTTGAATGAGCTTATGATAAAGGGTGAGAAAGAG AAGCAAGAATTGGAGAAAGAGCTTGAGATATATAGAAAAAAGGTTCATGAATATGAGGTTAGAGAAAAGATGATAATGTCAAGAAGAGATGGTAGTAGCA TAAGAAGCAGGAATTCATCACCCCCTTCTTGTAGCAATGCTGAAGAGAGTGATGGATTGTCAATCGATTCGAATCACGAAGCGATCGAAGCGAACGGATT TTATAGCCATCAAGAGTGCAGCAACCAGAACACACCAGTAGATGCTGTCATGTGTTTGGAGGAATCATTGGAAAACTTTGAGGAAGAGAGGTTATCAATT CTAGAAAGGATAAAGGTACTTGAAGAAAAGCTTGTTATATTGAATTATGAAGATGAACAATGCTACGATCTTCGAGAAGAGAATGGTAATGGATATCATG ATCATGGTAATGGTTATGCAAATGGTCATGCAAATGGAATAGATGGTAAGCATCATGAAGTGAGGAACATCATTGGTACAAAAGGGAAGAGGCTTCTTCC ACTATTCAATGCAATTAGTACTGAAGAATCAGAAGATTTGGTGTTGAGTGGAGATGAAAATGAGTTAGAATTTTCATCCTTTCAAAATGGTTCATCTGAA AAGTTTCACTTGGATAAGAAAAAGGTTGATTTGGAAGAGGAAGTGGGTCATGTTTATGAGAGGTTACAGATGCTGGAAGCAGATAGAGAGTTTCTTAAGA ACTGTTTTGGATCCTTGAGAAAAGGGGACAAAGGGTTAGATCTTCTCCAAGAAATTTTACGACATCTTCGCGATCTGAGGAATGTTGAATTCAGGGCCAG GAACATTGGATATCTTGCTGTGTAAGGAATCTTATGCTCAACCATGCCAAAGAGATAATAGATTTCCTATATATGAGTGTACATGAGCACCACCACTATG GTCTACATAGATAAAGAGCACCAATGCATCACTTCAATTTCAACAACAAAATTCAGTGGAAGGTTCCCTTATGGAGAGTGGAGAATCATGGTTTGATACA ATGGTAGACAATAAAACTGAATTCTGCATTACATTTATCTTTTCTTGTTTTTTTTCAATTCTTTTGTTTCTTTTGTCCAAGTAAGCCCAAGTTTTTGTGG GATGTGTCCATCATGATTCACCTTTGTGGAAAAGGTGTATGATGAGTGTATGTGTGTGTAGGTTAGTGAGGTGAAGCCAACCTGTCATTTGTATTTTGTG AGCAAAAGACCTGGCTGGCATAACTGGAGAGATCCAAAAGAAGATTCCAGTGCCAGTTGTATAGCATTAGTTTATTATAGGGACAGAATTAGGGTCAGTC ACTACTTTTGTCATTTCTTACATTCTTTTTTTGGTATCAGTGAAGATTGAGGTAAATAGCCTCTTTCTTTTCTCTTTTTCATCTTTTGCATCATATGAGG TTTGTTTGTTTCTTGAGGGAGAAAAGCTGAGTCACTTGTACACTACATGTATTCATTTGTAATATGTAATTATATAAAAGTGTTTGTTTGTTTCTTGAGG GAGA BLAST |
Tissue | pods |
Gene name | LI_gene_167421; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466075
Blastp | Myosin-binding protein 2 from Arabidopsis with 44.25% of identity |
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Blastx | Myosin-binding protein 2 from Arabidopsis with 41.34% of identity |
Eggnog | Pfam:DUF593(ENOG410YA8U) |
Kegg | Link to kegg annotations (AT1G70750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437376.1) |
Pfam | Zein-binding (PF04576.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |