Ll_transcript_467044

• Id Trinity: TRINITY_DN49210_c0_g1_i10
• Name Transcript: Ll_transcript_467044
• Sequence: TAACAGTGTGCTGCATAACACATAAGATAAGGATTTAAAGCTTCGCCATTCATTTCCCTCGCTCTATCATCATTACCCATTTCATGTTTTCCAATAAAGA CTTCATTTTTATTTACAAATTCCCTTTACACTTCTAGGACCATAGTGTTTCTTTTAATTCTTTTGGCCTTTTGAAGCTTCTGAGCACCAGATGAGCCGAT TCTGAGATATAATCGAGTTTTAGAATTCAAGTCAACATGAACCCTGTAATTCAATGCTTTGTTAGCAATGTTTCACCTATTGCTGGAATTGCTTTTCCAA CAAGGATAGATAATTCTTTAACAACACTCAGTCTGTCAAGGAGTGCAGTAAAATCCAGATCGTCTACTCGGAGATGTCTTTTACCTTCGTTTGTTGCGGG TGGAGTGTTTCAACAGAACAAAAGGAGACTCTCATTTTGTAGAAAATCTAGAGCCATATCAGCCACAGGAACAGAGATAGCAGTAGAGGAACCAGGTTCA GTTGTTGTAGGTGATATTTCTGGTGAAACTCCTTCAGATGAAATTGGAATAAGTGATGATTCATCTCCTAAGTCTGATGTGAAACCTGCACTAGCTAAAG CCAATAGTTTAAGACCTGCAAGCGCAAGAAGAAGTGACATGCCTCATGTGGAGACTGAGGATCTGATTCCCGGGACGACTTTTACTGGCAAAGTTAAATC TGTCCAACCATTTGGCGCCTTCATTGATTTTGGAGCATTCACAGATGGACTTGTTCATGTTTCAATGTTGAGTGATGACTACGTTAAGGATGTTTCAAGT GTTGTTTCTGTTGGACAAGAAGTGAAAGTGAAGCTGATTGAAGTGAACACTGAAACTCGGCGCATTTCACTCTCCATGCGTGAAAATGCAGACACTGGTA AGCAACGTAAAGAGGCACCCATCAATGCAGAGAAAGGTGGACCTGGGAAGAGGAACACTTCAAAACCAGGTCCAAGGAGAGATGGTGGTAGGAAAAGCTC AAAGTTTGTCATAGGGCAGGAACTGCAGGGTACAGTGAAGAATATGACTAGGAGTGGTGCTTTTATTTCTCTTCCTGATGGGGAGGAAGGATTTCTACCA ATATCCGAGGAACCTGATGATGGATTTGGGAATGTTATGGGAAACACATCGCTGGAGGTTGGTCAAGAAGTCAGTGTGCGTGTTTTGCGTATCTCGAGAG GACAAGCAACATTGACTATGAAGAAAGCGGAAGATGCTGTGAAAGTGGACACAGTACTTGGTGAAGGCGTTGTCCATGTTGCAACAAACCCTTTTTTGTT GGCCTTTCGTAAGAATAAGGATATTGCTAAGTTTTTGGATGAGAGGGAGAAAATTCAGAATACAGTTGAAAATTCTTCTACCACAAAAACTTCAGAAGAT GTTAAGGAAACTGTCAAGGAAGCGGAAGCTGTTGTGAAGGATGAACCAGAAAGCATCGAGACCTTGATAGATGATGCTCCTTCTGCAGATGATATTTCTG AGGAAGATGCGGGAGCCAGTGCATTTGATGGTTCCTCAATAGCTATTGTGGATGATGAAAGAGATTCAGTTCCCAATCTCTCTAGCCAAGCACCATCTAT AGACGATGCTGCTGAGAAGGACACAAAGGAGGTGGCTTCTGGAAGCTTGGCTCCTGAAGGGGATCTATCTACTCTAAATCCAATTATTGAGGAAGCCACT CAGGCAGATGTCACAACAAGCACCATAGAAACTGAGTCACCTCTTGAAACAGCTAATGGAAATATAATCGAAAGTGGAGTTGATCCTATCATTGTGGAAG ATGAACAATCACAAACATCTAATACAAAGGAAGGTTTTGCTGCAGCAGCATTAACAGACAGTGATGTTGTTGAACCTAGCCCTGATAATGTTGACACTAT TGCACCACCTCCCCAAGAAACTGCAGATGAGGCAGAAGAAAATGATCAAGTTCCCCCTCCTGAAACTCCTGCCACTGAAGTCATAGAAGGATCCATTGAG GAGCCCAAAGAAGAGCAAAATCAATCACCAAACACAGAGAATGAAAATTTGCTTACCTCACAAGTTGAACATAAAGAGGTTACAATTGCATCCGAGGAAA ATAATGCCTCATCTAATTCTAATGGGCAAACTAGCACTACTCCTTCAGATGAAGGCTCACTTCAAGCAACTATATCCCCGGCACTTGTGAAGCATCTTCG GGAAGAAACGGGAGCTGGAATGATGGACTGCAAAAAAGCTCTGGTGGATACTGGTGGAGACATTATTAAAGCACAAGAGTTCCTTAGGAAAAAAGGGTTA TCAAGTGCAGAAAAGAAAGCTAGCAGAGTAACAGCTGAAGGAAGAATAGGGTCTTACATCCATGACAGCAGGATTGGTGTTTTGATAGAAGTTAACTGTG AGACAGATTTTGTATCCCGTGGTGACATTTTTAAAGAGCTGGTTGATGATATAGCCATGCAAGTGGCTGCATGCCCTCAAGTAGAGTATCTTTCTACTGA AGATGTTCCTGATGAATTTGTGAACAAAGAAAAAGAGATAGAAATGCAGAAAGAAGATCTTTCATCTAAACCAGAGCAATTTAGATCGAAGATTGTTGAA GGGAGGATAAGAAAAAGGCTTGAGGAGCTGGCATTGCTTGAGCAACCTTACATTAAGAATGATAAAGTGGCAGTAAAGGACTTTGTTAAGCAGACTGTTG CAACTATCGGAGAAAATATTAAAGTTAAGAGGTTTGTGCGTTTCAACCTTGGGGAGGGTTTGGAGAAGAAAAGCCAGGATTTTGCTGCTGAAGTGGCTGC ACAAACTGCAGCTAAGACAACACCTACTACACCAGCAATAGAGCAACCTGCTGTTACAGAAGCCAAGGAGCCCGAGAAAAAGTAAGCAGTTATATGAATT CTTAATTATTATATAGTGTTATGGAATATCAAGTCTTAAAACAAGTTCCGGTCTCTGTAAATATGGTGATTTTTGGGTTAGTTCCTAACTTCCTATTTGA ATTTTATTCATTTTGGTCACTCAATTTACGAAGTACAGTGTGCTTTTGGTCCCTCCTCAGGGACTAAAAACGCATTGTTTTCATATTTTAGAGATTAAAA ATGAATGAAGTTTAAATAAGAACTAAAGTTAAAAATGCCATGCATACATGGACGAAAAAGTTACTTGAACCTCATGTGCTAAAGTTTATATAATCACACA AAAGGAGATATCATGTTCATCCTGACATTGATTGGCTAAGCAGTTATATGCAAAAAGGTGGAAGCAATGGTTAGTATTTTCTTTTTCTCCTCTTTAGCAT CCACATATGATTTATACCAGACTCTTTCTACAAATAATAAAAAGATTGACTCGTTTAAAATCCAGCAAAAGAGATGTAAGAATTCAAATTATATCAGTTT CTAGAGAGGGAAAAAACCAATTCTGCTGGCTCTTGCTTTTATTCAATATTCTGCAAAGAAAACACCATTTAAATAGTCAAGCCCCCGCAGAGAAATATAG CTGATTTCTCTTGCTTTAAATGATTCATTATTCTGCTGCAGGCAAGCAACAGTAACAGTCTCTGCCGCATTGGTTAAACAACTAAGGGAAGAAACCGGAG CCGGAATGATGGACTGTAAGAAAGCTCTTGCTGAAACTGGAGGCGATCTTGAAAAGGCCCAAGAATATCTCAGAAAGAAGGGTCTCTCATCTGCTGACAA GAAATCCAGTAGGCTAGCAGCTGAAGGCAGAATCGGTTCATACATTCATGATTCGCGCATCGGCGTTCTAATCGAAGTGAACTGTGAAACTGACTTTGTT GGCAGAAGCGAAAAATTCAAAGAGTTGGTCGATGATCTTGCAATGCAAGTTGTGGCATGCCCGCAGGTGCAATATGTATCCATTGAAGATATTCCAGAGA CTATCAGGAACAAGGAAAAGGAACTTGAGATGCAAAGAGAGGACCTTGCCTCAAAACCTGAAAGCATAAGAGAGAAAATTGTTGAGGGAAGGGTCTCAAA GAGACTTGGGGAACTTGCACTTCTAGAGCAGCCTTATGTTAAGGATGATAGTCTTTTAGTGAAGGACTTGGTGAAGCAAAGTGTAGCTGCTATTGGAGAG AACATCAAAGTAAGGCGTTTTGTAAAGTTCACTCTAGGAGAGACTATTGAAAGTGCAACAGAAGTAGCAGCATAAGTTGAAAAGTGTCATAAAAACATGA ATGGTAACATGGGAAACCTTATATGTTACAAGAGAATGTGAAGAGGTATGGAACAGGTTCAGAGTAGTTTGAAAAACAGTATGATACTGAATAAGGTGCA GTCGGCATGGACACATTTTACTAATCTGTATCCACATTGAGGTACACGAGAACAATAGTTTTTTAATTAATTTTATGCAGTTTGTATGTTGAAAAACTGG TGGATGCATTTTTTTAATTACCAGTTTCATTAAGTTTTAAAGTACCAGTTTCTTAAATTCTTGAATGGTTTCTTAAAACTGGTTGAGATGGAACCTTAAT ATGGGTTCGGCCTAATTTTTCTTCTCATAGTCAAATTGGTTTTAAGATTATTTGACTCATTTTAAATCCATTCAACTCAACAATGAATCATGATTACAG
• Tissue: pods
• Gene name: LI_gene_167424;
• Additional information: details;

Expression of Ll_transcript_467044

FPKM

• PAB: 0.7
• PNAB: 1.5
• PS1: 4.8
• PS2: 0.2
• PS3: 0.1
• PW1: 0.3
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467044

• Blastp: Elongation factor Ts from Cyanothece with 62.01% of identity
• Blastx: Elongation factor Ts from Prochlorococcus with 64.73% of identity
• Eggnog: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity)(COG0264)
• Kegg: Link to kegg annotations (PCC7424_1152)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457841.1)
• Pfam: S1 RNA binding domain (PF00575.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;