| Id Trinity | TRINITY_DN49210_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_467040 |
| Sequence | TTCACATGTTTTTCTGTATCAAACTGAAGTGGTTATATTACCAGCAATTACATGTTGATCAATAACATTGCCTTTGAGGGCTTAATAAATGAGAACTCTT CACAGAAGTACTTCACCTTCATTGAATTTATTGTTTCTTCCTACCTGTTGAATTCTTTTCTTTGCATTCTTACATAGGATTTTCATATCCTAATAGTTTA ATGTCTATTCTTTTTTGTGGGTTGAAGCAACTATATCCCCGGCACTTGTGAAGCATCTTCGGGAAGAAACGGGAGCTGGAATGATGGACTGCAAAAAAGC TCTGGTGGATACTGGTGGAGACATTATTAAAGCACAAGAGTTCCTTAGGAAAAAAGGGTTATCAAGTGCAGAAAAGAAAGCTAGCAGAGTAACAGCTGAA GGAAGAATAGGGTCTTACATCCATGACAGCAGGATTGGTGTTTTGATAGAAGTTAACTGTGAGACAGATTTTGTATCCCGTGGTGACATTTTTAAAGAGC TGGTTGATGATATAGCCATGCAAGTGGCTGCATGCCCTCAAGTAGAGTATCTTTCTACTGAAGATGTTCCTGATGAATTTGTGAACAAAGAAAAAGAGAT AGAAATGCAGAAAGAAGATCTTTCATCTAAACCAGAGCAATTTAGATCGAAGATTGTTGAAGGGAGGATAAGAAAAAGGCTTGAGGAGCTGGCATTGCTT GAGCAACCTTACATTAAGAATGATAAAGTGGCAGTAAAGGACTTTGTTAAGCAGACTGTTGCAACTATCGGAGAAAATATTAAAGTTAAGAGGTTTGTGC GTTTCAACCTTGGGGAGGGTTTGGAGAAGAAAAGCCAGGATTTTGCTGCTGAAGTGGCTGCACAAACTGCAGCTAAGACAACACCTACTACACCAGCAAT AGAGCAACCTGCTGTTACAGAAGCCAAGGAGCCCGAGAAAAAGCAAGCAACAGTAACAGTCTCTGCCGCATTGGTTAAACAACTAAGGGAAGAAACCGGA GC BLAST |
| Tissue | pods |
| Gene name | LI_gene_167424; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467040
| Blastp | Elongation factor Ts from Cyanothece with 57.69% of identity |
|---|---|
| Blastx | Elongation factor Ts from Prochlorococcus with 63.77% of identity |
| Eggnog | Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity)(COG0264) |
| Kegg | Link to kegg annotations (PCC7424_1152) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457841.1) |
| Pfam | Elongation factor TS (PF00889.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |