| Id Trinity | TRINITY_DN49216_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_467090 |
| Sequence | AAAAATTAAACCCATTATACCTTTCTAAATAACAAACACATATATTTTTCTACAAAGAACAATGTTGTATCCTTATTTCCACCTCCTAGATTGCATTGAT TCGAAAAGTCACCAACATTGAAGATACAATCAAACACAAACATTGGCAACAACTTATATAATCCTTCAGCTAAGGAATCTTGTTTTCCTAAACAGCAAGT TCTGTTTTTTTGTAACCGAAAAGAAAAGAAAGAGTTCATTGTTTTGGCCTTTTAGGAACGAAAACAAGAAGCTCAACGTTGGTGGGTACTTCAAGAACAA TAAGCTTCATAGAGCAATAGAAAGTTCAGATCTTTCACGATATTCCTCATCCATTGTAGGGTAGGCACATAATAAAGTAATATGAAGTTAAATAGCAGGG GATCGAGAAAATCCAGTCATTCTGATGCACAAGCTGAGTCAAAGCCAGATTCATCATTGAGATTCAAAATAACACGACACCGAGGTAAAATGCATATGCT AAAATCAAAATCTCGCACACACAAAGTTGACCCAAACACACCAAGGAAGAAAGTTACCGACTCTTCCATCAAGGGGCCAAGCAAGGTGTCTTCAACTAAG AAATTAATTATTAAACAAAGTTCACATAAAGCCGATGGAAAATTTCCACAGAATATGTCCTCAAATCTACAATGCAAGAAGGTTAGGGAAAAAGAGAAAC ATGATGGGGAGGTAAATCTTCAAAAAGTAAAGAGAGGGAGAAAAAAGAAAAGGCAAAGGAATAACGTGAATCTTGATGATGCTTCACGTCTGCAGCGGAG AACTAGGTACCTTATAATCAAAATGAAGCTAGAGCAAAACCTTATTGATGCTTACTCTGCAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAGATTAGGCCA GAAAAGGAGTTACAAAGAGCACAGAAGGAGATTTTAAAATGTAAACTTAGTATTCGCGATGCTATTCGCCAGTTGGATTCTCTGAGTGGCATAGAAGATC AAGTCATTGCTCCTGATGGATCTGCTAACCATAAGCATATATTCTGTGCAAAGTGCAAGTTGCGTGAAGCTCTTCGAGACAATGATATTGTTCTCTGTCA TGGTACATGCAGTCGTGCTTTTCACCAAAAATGTCTCGATCCTCCTTTAGACTCTGAAGATATTCCTCCGGGAGGCCAGGGCTGGTTTTGTAAGTTTTGT GACTGTAAGATGAGAATACTGGAGGCAGTGAATGCACATCTTGGAACTCACTTCTCCTTGCACAGTACTTCACAGGATGTATTCAAGGAAGAGGCTGCAA TGCCCGATGGTGATACTGCATTAATGAATCCTGGAGAAGAATGGCCATCGGATGATTCTGAAGATGAAGATTATAATCCAGAGAGAAGAGAAGGTGACCA CAACATCAACACAGAAGGAACTGATGATGATGCATCCGATGATTTCGGTAGTTCTGCGAGTCTGTGGTCTTACGACAGTGAATGTTCTCCAGTTGATGAA GGTGTCAACCATGAATGTTTTTCTGTCAATAGCTGCATTGACTCTGATGAATCCGGAGAAAAAGCCTGTGGCCGTAGGCATCGGAAAGCTGTTGACTACA AGAAACTTTATGATGAAATGTTCGGGAAGGATGCTCCTGCATACGAACAAGTGAGTGAGGATGAAGACTGGGGTCCTAGCAAAAGAAAGCGAAGAGAAAA GGAGTCTGATGCTGTTAATACTCTGATGACTTTGCATGAAAGTGAGAACAAACATCCCAATAATGAGCACAACGGAATGATAAGAAATGATTCTTCAGGT ATACAAATCAGAAAGCCTTGTTTTAGGTTTCCACCCGCTGCAACTGAGGTACTACTAGAACACTTATCATTTTTCTTTTTTGTCACGTTTCAAAATTCTA GCTGAGAACAACTATATAATGAGTTTTATGAACTAGTCTATGTTCCTTTCATTTTCTTTTGAAATGAGCCAGAAGCTACGCCAAGTTTTTGCGGAGAATG AACTTCCTCCAAGATCGACGAAGGTGGATCTTTCAAAAGAGTTTGGACTTAGTGTTGAGAAGGTTAGCAAATGGTTCAAAAATGCACGTTACGTAGCACT TAAAGCCAGAAAGCTACAAGGAGCAGATCAGCTTCATAGTTTCACTCCTAGAAAGAACTCTACATTGCAAAATATGGGAGAAGCTGAGGTTTTGAAATCA AAGGCCTCAAAAATTACTGTGAACCATTCCACAAAGAATGCAAAAAATGTCACTGCTAAGATGAAGACAAAGTCAGATAGCAGTACTTTGAGGAAAAGAC AACCAGAAATATTTTCACCTCAGCCAAGTGAAAATGTAAACAAGGACATTATGGAGATCAGCGATGATGTGAGCTTGAAGAAACTATTGAAAAAAAGAAA GAGGAAAGCGAAGTTTTCATTCGAAGGAGGTTATCAGGAAGCAGAGTTCGAATTCGAAAGACTGAGCAAATTGAAGATTAAACTTGATAGTATGAAGCAA AAATTAAGTGCAATTCAAAATTACAGAGGAAATAGTTCTTATGAACCCCAGCAGAAAGAGCCCTCTACTATATTTGTACCCATAGCTGTGTTGAGGGAAA AGGTTGAATTATAATTGGTTTTTCAGCATTTACATACAAGGGTAATACATGATTAGTTGTTATTAGTCTGATGAAAAAGAAGCAACTATTTTTTTAATAA TATTGCTTTACAGATAATGTTGCTTATCTCAATGTTAGCCTACACAGAAATGTAATACTTCTTCCTATTGGCTTAATGATGTGACATACAGAAGAGCCAA GAAAGCCCGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_167445; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467090
| Blastp | Pathogenesis-related homeodomain protein from Arabidopsis with 53.65% of identity |
|---|---|
| Blastx | Pathogenesis-related homeodomain protein from Arabidopsis with 54.01% of identity |
| Eggnog | PHD finger protein(ENOG410XQQA) |
| Kegg | Link to kegg annotations (AT4G29940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442538.1) |
| Pfam | PHD-finger (PF00628.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |