Ll_transcript_467074

• Id Trinity: TRINITY_DN49216_c1_g3_i3
• Name Transcript: Ll_transcript_467074
• Sequence: AGAATGATATTTATTGGGAGGTACAACAAGCACCGTCAAAATCGATTAATTACTTACAAACAAAAAAAGCAAAAAGTTAGTAGATACTCTTGTTAAAGGA AAATCTTACTATTTCTTTCAACTTTTACAGATAAATAGTACAATTTTCTGGGACTGTCATAATAAGTTACACACCAAAACAAAGAGAGAGAGAGAGAGTT AATAAGGAAGAGTTTCCATAATGGTGATGCTTTGAGAACAACCACACCACCATCTCCGGTAACTGCCCTATTCAACATTGGAATTATCACACCCCTTTTT CCTTTTTCCTTTTTCATTCCAATCATTCTTTCACAATTCTAAACACTCACTTTTATATTCAACAATCTTCATTCTTTCACTGTCACATAATTGCTTCATA CTTCACACTCATACAAAAAATTTCAGATCTTTCACCATATTTTCTCTACCATTATAGCTTTTTTCTCTTATTAGGCCTTAAATTCATGTGGGTTTCTCTT CTTTATGCTTGCAACTTAGTGTGGCTTAATAAAGTCAAGGTCTTTGGTATCTTGGTATTAATAACCACTTGGGGTATTTGAAATTTGTTATGTTGTTTCT GTGATTGAATTATGTTTCTGAAAAGGATTAGTGAAATTGATGATTGCATATTATGTGGTTCTCTATTTAGTCTTTGAACTGATCATGGTATTATTGGACA TCATCATGCCTATGATTTTTTCTTCTTCACTGAATTAGTAAAGTGATTATTGATTCAATGTTCTTCATGGTCTTTCTTTGAGTGTTGACTATGTAATTGT TAATTTGGTTGCTAATTCATTTTTCGCTGCGAGTTTTGGTGAACTGTTGTGTATGGATTGTTATGCTTTGATTTCGGGTAGTTTAAATTCTCGATTTTTA TTCAATTGGTGACCTTTTCTTGATTTCCTGGGTAACGAGTCGTCGGCGATCACTGCCCTTGGGCTAAGTTATGTATGATTATAAGTCTAAATTGATCCAT TCACTAGTGAATCCTACATCATGCAGTTTTGTCATTCTTGAATAGATTTTTTTCGTTCTGTCCTTTTATTTTGTTGGAAGAGCATTAGTGGAATATATGT AAACTCGGAGAGTTAACATAAGAAAAGCAGTTGTGGAGTCTTGATATTTCTTTCCAAATATGTTTAATGCACTCCGAGCACATATGATGATATCATCGGT TGCAAATTCTTCCATTTCTGTCTTCATACAAAATATCTGTGTTTGTGCAGGAAGTTTTTAGTTAGATTAGCATGCTAATAGTACTTTTTGTTTCACTATT TATCCACTTTATGCATGAACTTTTCAAAGATACCGAGAAGAAGTTAAATATGAGAGGACCTAAGAAATGCAGTCATTCAAAGGAAAAGACTGAGTCAAAG TTAGACTCATTGTCGAGATTTGATCCAAGTAACACAAAAGGCCGAGTGAAGAAGAATAGGTTGAAATCAGAATCGTATAAACACAGAGTCGGCACAAACA CATCAAGAATGAGAGTTAATTATTCTTCCTTAGAGGGGCCAATCAAGGACTATTCAAATAAAAAATTGATTATTCGACAAAATCCGTGTAAAACTGATGG AAAATCTTCACAGATGCAGTCTTCAACTATGCTACATGGCAAAAAGATTCCTCTTTGTTCAGGAAACGAGGGAGAAGATATTGACCGGGAGGCAAAGATC CATAAAATGAAGAGAAGGAGAAAGAAGAAAAGGCAAAGGGATAATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGAACAAGGAACCTCTTAATCA GAATGAAACAAGAGCAGAACCTAATTGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAGTTACAAAGAGC AAAGAAGCAGATTTTAAAATGTAAACTTAGTATTCGTGATGCAATTCGTCAGCTGGACTCTCTTAGTTCAGTGGGTAGCATTGAAGGTTCCGTCATTGCT CCAGATGGATCAGTTTATCATGAACATATATTCTGTGCAAATTGCAAGCTGCGTGAAGCATTCCCAGATAATGATATCATACTCTGTGATGGCTCATGCA ATCGTGCTTTTCATCAAAGATGCCTTGATCCTCCTTTGGACACTGAAAATATTCCCCCGGAAGACCAGGGCTGGTTTTGCAAGTTTTGTGAATGTAAAAT AGAAATAATCGAAGCAACGAATGCCCATCTGGGCACTCAATTCTCCTTGGACAGTACTTGGCAGGATGTATTCAAGGAAGAGGCTACTTTACCGGATGGT GATAATGCATTACTAAATCAAGAAGAAGAATTGCCGTCAGATGATCCTGATGACGATGATTATAATCCAGAGAGGAGGGAAGACAGCCTCAGCACCAACG TAAAAGGAACTGATGATAATGCATCTTTTGATTCAAGCAGTTCCACCAGTGTGTCGTCTTTGAGTAGTGAATGTTCTCTAGTAGATGAAGACATTTGCCG TGAATACTGTTCTGTGAATAGCTGCATAGATTCTGACGATTCCGGGCAAATAGCATGTGGCCATAGGCAGCGTAAAGCAGTTGACTACAAGAAGCTTCAT GATGAAATGTTTGGGAAGGATGCTCCTGCATGTGAGCAAGTTAGCGAAGATGAAGATTGGGGTCCTGGCAAGAGAAAGCGAAGAGAAAAGGAGTCCGATG CTGCTAATACTCTTATGACACTACATGAAATCGAAAATAAAAATTGTAATAATGATTCAATAAGAGAGGGCTCTTCTTATCTACACAAAAAAAGACCTTG TTTCAGGATTCCACATGATGCAGTTGAGAAGCTTCGTCAAGTCTTTGCACAGAATGAACTTCCTTCAAGATCCATGAGGGAAGCTCTTTCGAAAGAGTTG GGACTTGACTTTGCGAAGGTAAGCCTTACAGTCTCTAGTTGTGTGTACCTTGTTGCTATCTTAACCCGAACTTATCCTGCAAAGCGGCATTACATTTTTG GAATTTTATATCATCTAGCTCTTGCCAGTTATTTGCATAGCTTTTGGTCTTTATTTATGTCTAGAAGATCTTCATCTGTTCAAACTTCAGAGTTCCTCTT ACTAACATGTTAACAAATGCAGGTTAACAAATGGTTCAAAAATGCACGTTATGCAGCACTTAAAACCAGAAAGGTAAACTTTATAAATGCCTTTGCTTTC TCCTTTTTCAATTTTTGCTTGGTTAATATTTTTTAAGAAAATCACCCACATGTATTAATAACCACCCTATCTAGATATCCTTTAGCTATGTACTAAACCA CAATGAAGTGTTCACATTTCACTGTGTATTAATAAATATGCTTGTGACTTATAGATTTTGTAATAACTACAAAGTTAATAAGCACCTATAATAGACATTT AAGGATTTAGTAACAGTTTGTGCCTTTGCACATAACTTGGAGAAAACAAAGAAGAGGGTGAGGTTGGCGCAACGGTAAGATCACAGGTTGAAATCCTGGA AACAACCTCCTCATTGTACAGGTAAGATTGCATGCATTAGGACACATTTTCAATTTGTGCTTCATTACTTTGGTAAATGCATACTTCTGCTAGTTCTAAA TCCTATACCTGCCATTGTTTCATGTCAGACATTCAGAAATTGTTTTGTAATTGGAATTTGCAATAAATTGTTTTATTCTTCAGTGTCAATCTGAAGGAGA ACAACTTAAGAGTTTCACTTCCAAGACCTCAAAGGATTCTAAATCACAAAATATAGAGAAAGATGAGCTTCTGAGACCGAGGGCCTCCAAAATATCCGCA GTCCATTGCCAGAAGAACGGTAAAAATGTCACAGGCAGGGTGAAAACAAACTCATGCCGCATTCCTTTACAGGAAAGGCGACAAGAAAACAGCAACAAGA TATTGTCGAAAAACGAAAATGGCAACAAGGTACTTTTAATCTTCCATGTGCACTGCTGTATAAAATTTGGCACAACTTAAACTTACAAAACACTTTTGTT ATTGAAGGGTAGTAGTTTCATTAACAATTTCGTTCCACTTGAACTTTTTCGCATTTGGAAGGGCCCGATTTAGCAATTTTTCGTCTTTTATTTTCAGGAC AAGGAGGTAAGTGATGATGTTTGCTTGAAGAAATTGTTGAAAGAAAGGAAAAGGAAGGTAAATTCTATATTTGAAGGAGACTTTCATGCAGCAGAGTTGG AATTTGAAAGACTTAGCAAAGTGAAGAATAAAGTAGATAGTATAAAACAAAGACTAATTGAAGTTCAAAATTGCAGAGCAAAGGGTTCAGATGAATCATG TTCTATTGAATCTTCTGTCACATATGTACCTATAGCTGAGTTAAGGGAAAAGGTTTAATAGTAAATATATGTTTTAACATTTATTTTTATCTGTAGTGAC CTTACATTGCACAATGAAAT
• Tissue: pods
• Gene name: LI_gene_167447;
• Additional information: details;

Expression of Ll_transcript_467074

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.3
• PS2: 0.5
• PS3: 0.7
• PW1: 0.3
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467074

• Blastp: Pathogenesis-related homeodomain protein from Arabidopsis with 56% of identity
• Blastx: Pathogenesis-related homeodomain protein from Arabidopsis with 56.47% of identity
• Eggnog: PHD finger protein(ENOG410XQQA)
• Kegg: Link to kegg annotations (AT4G29940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415771.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;