Ll_transcript_466781

Id TrinityTRINITY_DN49217_c3_g2_i1
Name TranscriptLl_transcript_466781
SequenceCCAGAACAGAGCTTGCATAGTTCTCCTGCTAGAGAAGAGGGTGAAGTACCTGAATCAGAATTAGACCCAGACACAAGGCGCAGGCTTCTCATATTGCAGC ATGGACAAGATATTAGGGAGAACACATCAAGTGAACCTCCATTTCCTGTCAGACTTCCCGTACAAGTTTCACCTCCACATATCCCATCACATGCGGGATG GTTTCCTGTAAAAGAGGAAAGGGGTCCACAGCAACTAAATCGGGTAGCACCGAAAGAATTCCCTGTGGAGTCTGAACCGTTGCATATTGAGAAGAAGTGG CCTCGCCATCCATCCTTTTTCTCCAATGTTGACAATCCTATGTCATCTGATAGAATTCTCCATGAGAACCACCAAAGATTGCCAAAGGAGGTTTATCAAA GGGATGATCGCTCGAGATTAAACCATACACACTCTAGCTATCATTCTTTCGCCGGTGATGACATTCCCTTGGGTAGCACTTCTTCCAGCAACTGGGATCT TGACTCTGAATCTGGACATCCTTTATTTTATGCAGATTCTCCAGCTGGCGTATTACGTGAAATTGCACTGAAGTGTGGAACTAGGGTGGAGTTCTTGTCA TCTTTAGTTGCTAGCACGGAACTGCAATTCTCTATCGAGGCATGGTTTGCGGGAAAGAAAATTGGGGAAGGAATTGGTAGAACAAGAAAGGAAGCCCAAT ATAAGGCTGCCGAGGATTCTATTAAACAATTAGCTGATATATATATGTCCCATACAAAGGCTGATTCTGGTTCCACTTATGGTGATGCAACTGCGTTTCC TGGTGTGGAGGACAATGGTTTTATGAGTGGTGTTAATTCTCTTGGTAATCAGCTATTGCCTAAAGAAGAGTTGGACTCATTTTCAACTGCATCGGATCCA TTAAGGGGGCTAGATCCTAGATTTGAAGTCAAGAGGTCAATGGGTTCAATTTCTGCCCTCAAAGAATTGGTAAGCTTTTTAATAAACAGAGCAGCCAGTT TTTTATCCATTTATTTGTGTTGGAGTTGGTTTTAACATGCTATAAAATCCTGCACCCAACTTCTTTAGTGCATGATGGAGGGTCTAGGTGTCAGTTTTCA CTCTCCACCTGCTCCTGTGTCAACAAATTTTGTACAGAAAGATGAAGTACATGCACAGGTTTGTTGATATACTACTCCAAACAAATGGAGTTAAAATTAT TAGTGTCTTTAAATTTCTGAAGGGTTTATGCTTCTCTCTCCCCTTCTATACTAGTTTCTCATTTATGATTTTTAATTTGTATTTATTGTAGGCACAGAGC TTACATTTTTCTTCTTTTCTATTTTCACTGCATATTTGGCCCATAGGGTGGCGGTTAGCGAGTTAAATGTTCCCTAGATGGAATTCCAGAACATTCTTAA GTTGCCTTCACTTTTATATATACGGCTTACAATTATTTTTGTTTTGAGAATTGGAGGTGAATAGTTACTGGTATACTGACATATAATTGAAATTCACTTT TACTTTCTCTAGTGTGATAGTTTGGCAAAAACATCATCCTGTAGTTGTGTAGGGCTTATAAGAAGTGAAGGAAGCCTTCTTTCTTTTCTATAAATACATT TTTAGGCTTAAATATATTTTTTTGTCCCAGAAAAGTATACCGAATTTTGGTTTTATCCCATACAATTTAATTTTTTTGGGTTTTGGTTCTTATATCTTCC CAAAATTTTGATTTTATTCTCCAATGATGATGTGGCTAACACCAACATGTGACACATGTCATACTATCTGATGGCGTGAACAATTGTGGTTTTGACATAT CATTGGCAAGGACAAGAAACAAAATGTTCAACATTACCTATATTGTTGACAGTAAAAAATTATTTAAGCCTACATTTTAGGGTCTTGTTTTTCACCCACG TTAATGTGTTCCTTTTTTTAGTAAAAAGATCTAAAGTTCTCTAATGATTTAGGTCGAAATAGATGGTCATGTGTTTGGTAAAGGGATTGGGTTAACATGG AATGAGGCTAAAACGCAGGCTGCCGATAAAGCACTTGGAAGTCTAAGGACAATGCTTGGTGAAGGCACTCAGAAGCGGCAGGGTTCTCCTCTCAGGTCAT GGCGAGGATTTTCGAATAAACGAATGAAGCAAGAATATCCCCGAACTCCGCAGCGGATTCCTTCGTCTGCCAGATATCCCAGGAATGCTCCTCCAGTCCC TTGAAAGAGTAACAGCTTTTCATCTCACTTTATCAGCATGCCTTATGTTGGGAGAGTATGCATTTGTTACAGAAGCAAGAATTTGGAGAATACTTGATGG ATGAATGATGCTCGACCTCTCAGTCTTTTTTATTACCAAATCCAATGCCAAGCAGAACCTCCACTTTTCTGCATCAACTTAACATCCTCACTCAAGTTGT TGAGATACCTGGACCAAGATTTTGTAACATAGTCATACCTTGGTCCTCTCAGGCAATAATGCAGTGCTTTGAGGTTGGTTCAAAAGATGTTGTGCTGTCC ACATGCTGTACTTGTATTTATGTGGCTTGTAATCTCTTTGTGCCAGTGTTACCCCAAGAGAGGTGCATTTGATTCATCATTAATTTTATTTGTCATCTGA AGTTATGATACACACCATTTAGTACAGGCCTTTTCACTGGTTTTTCACTAACCTTACACTAGTCATTTCATGATGCCACTCACAAATTATATAGCCCTAC ACAACCTTCTGGAGGCGCTGTTATGACCCCTAGTTTTAAGTATTATGCCCATTAGGTGAGAGTCTCATGCAATAGATCGTTTTGTTTTTAGTCTCATTAG GTGAGAGTTTCGTGCAATAGATCGTTTTGTTTCTAGTATTTTGGTGAGATTTTTACTTTTTCTTAGCAGACATCATTTTCATAGTTATATCATGTGTGCT TGTAAACTGAAATTTGACGCAAATAGCTAATAAACTTTGTTGTGCTAAATATACAAAATTGGATGGTTGGAAATGAAGAGTTCATAAGGATAGAGATAAG TTTGTCCAAA BLAST
Tissuepods
Gene nameLI_gene_167454; 
Additional informationdetails; 

Expression of Ll_transcript_466781

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_466781
BlastpRNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 52% of identity
BlastxRNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 47.03% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
KeggLink to kegg annotations (AT4G21670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019425587.1)
PfamDouble-stranded RNA binding motif (PF00035.25)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;