Ll_transcript_466790

• Id Trinity: TRINITY_DN49217_c3_g2_i3
• Name Transcript: Ll_transcript_466790
• Sequence: ATTCAAACCATTGGATGTATCTAAAATTGATGGTTAAGATGAAGAGTAAGTCTAAAAGAGTTACTCTTGGAGTAACTTGATCCCCACCCTTTCTTTATTT GGCTTTGATCCTTATATATTCCAAAAATTCGGTTTTAGTCCTTAGTGGTGACGTGACTAACACCCACATGTGGTACATGTCATATTAATTGTTGGTGTGA CCAATTGTGGTGTTCACACATTATTGGCATAGACTAAAACCAAAATTTTGAAATATATAAGGACCTAAACCAGAGAAAAAATATAGGGACTAAAACTAAA ACATGCTAAATTTATTATTATCATTATCTTCTCTCATGGTGTTGCAGCACTGTACTATATGACTCACATGAATGTTTTTCTCTTTAGGCTGCCGATAAAG CACTTGGAAGTCTAAGGACAATGCTTGGTGAAGGCACTCAGAAGCGGCAGGGTTCTCCTCTCAGGTCATGGCGAGGATTTTCGAATAAACGAATGAAGCA AGAATATCCCCGAACTCCGCAGCGGATTCCTTCGTCTGCCAGATATCCCAGGAATGCTCCTCCAGTCCCTTGAAAGAGTAACAGCTTTTCATCTCACTTT ATCAGCATGCCTTATGTTGGGAGAGTATGCATTTGTTACAGAAGCAAGAATTTGGAGAATACTTGATGGATGAATGATGCTCGACCTCTCAGTCTTTTTT ATTACCAAATCCAATGCCAAGCAGAACCTCCACTTTTCTGCATCAACTTAACATCCTCACTCAAGTTGTTGAGATACCTGGACCAAGATTTTGTAACATA GTCATACCTTGGTCCTCTCAGGCAATAATGCAGTGCTTTGAGGTTGGTTCAAAAGATGTTGTGCTGTCCACATGCTGTACTTGTATTTATGTGGCTTGTA ATCTCTTTGTGCCAGTGTTACCCCAAGAGAGGTGCATTTGATTCATCATTAATTTTATTTGTCATCTGAAGTTATGATACACACCATTTAGTACAGGCCT TTTCACTGGTTTTTCACTAACCTTACACTAGTCATTTCATGATGCCACTCACAAATTATATAGCCCTACACAACCTTCTGGAGGCGCTGTTATGACCCCT AGTTTTAAGTATTATGCCCATTAGGTGAGAGTCTCATGCAATAGATCGTTTTGTTTTTAGTCTCATTAGGTGAGAGTTTCGTGCAATAGATCGTTTTGTT TCTAGTATTTTGGTGAGATTTTTACTTTTTCTTAGCAGACATCATTTTCATAGTTATATCATGTGTGCTTGTAAACTGAAATTTGACGCAAATAGCTAAT AAACTTTGTTGTGCTAAATATACAAAATTGGATGGTTGGAAATGAAGAGTTCATAAGGATAGAGATAAGTTTGTCCAAA
• Tissue: pods
• Gene name: LI_gene_167454;
• Additional information: -

Expression of Ll_transcript_466790

FPKM

• PAB: 1.8
• PNAB: 0.7
• PS1: 1.1
• PS2: 1.1
• PS3: 1.7
• PW1: 0.5
• PW2: 1.5
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_466790

• Blastp: -
• Blastx: RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 58.49% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (AT4G21670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425590.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;