| Id Trinity | TRINITY_DN49230_c4_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_466312 |
| Sequence | CTTCGTCCTTGTGTAGAGAGAGAAAGAAAGAAAAAAAAGACACTCACTCTTTTTTTAATGTTCTTGTCTTGAGAGAGAAAGAGTGAATCTTGGAAAGATA AGCGCCTTCTCCTTTAGACAAAGTTAACATCTTTAGCTTCATTTCTTCACCAACGCTACTATTTCTGTAATGGCTCTTCCTTAACTTCCTCTCTGGTTTC CATTTTTCAGATAAACAAAACACCCCAAGGTACTTTCTTCCACTTCTTTTCTTAGCTCAACTACTTCCTCAATTTCCAATTCAGAATTAAACTTTCAATG TTCATTTTAATTCTCCCATTCTATGAACTTTGTTGCACTATTCATAACTTGGTTAAAGTAGTGTAGCAACAAAATAGATGAGAATGAATATGGGAAAGGG TTAAATCATGATGTTGATTTTTTGAAACAGCATATAAACATGGATGAACTACACATACCTCAATTGAGCCCTTCACAGATGAGAACATCAAGGCATCATT TTCAGCATAGTTTTGATGGAAACAAAAGAGTAGGGATACCACCTTCACATCCTAACCAGATCCCACCAATTTCACCATATTCTCAGATCCCACTATCACA AAGATCACAAACTAGTCCCACACCTACACCAACACATTCAAGATCATTGTCACAACCATCATTTTTCAATCTTGATTCTCTTCCACCTTTGAGTCCTTCT CCTCCGTTTCGCGACTCGGCTTCAACTTCCTTATCAGATCCTCCTGCTGATGCCTCAATGGAAGATCGTGATGTTAGTTCTTCACATTCCCTCTTGCCTC CTTCATCACCTTTCAGTAGAGCCAATAATAGTAGCAATCCTTTATCGTTACCGCCTCGAAAGCCGCATAGGCGCTCTAACAGTGATATCCCATTTGGGTT TTCCACTGTGTTGCAATCTTCATCGCCCTTTATTCCCCTCGGGGGTTCGCTGCCAAAACAACCTGCGCAGTTGGTTAAAAAGGAAGCAGGTTGGGACAGA AGTGTTGACCATAATGAAGATGAATCCGGCGAGAAGTCTCCGGATGGGGAAGTTATGGATGATCTTTTCTCTGCCTACATGAATTTGGATAACATTGATG CACTCAACTTGTCAGGGACTGATGACAACAAAATTGGGATGGAAAATCGCGATGATTTGGACAGTAGGGCGAGTGGAACAAAGACTAATGGAGGTGATAG CAGTGATAATGAAGCAGAAAGTAGTGTTAATGAAAAGACGAGTTCTGAAAAGAGGGAAGGGTTGAAAAGGAGTGCTGGTGGTGATATTGCACCAAACTCA AGGCACTATAGGAGTGTATCAATGGATAGTTTTATTGGGAAGTTGAACTTCAATGATGATTCCCCTAGGCTGCCACCTTCACCTGGTCATCGTCCTGGAT TCGTTTCACCTACTAATGCAATCTATGGAAATTCAGATGCCTTCAGCTTGGAGTTTGGACATGGTGAATTTAGTGGGCTTGAATTGAAGAAAATTATGGC TAATGAAAAGCTTGCTGAGATTGCTTCGAGTGATCCGAAGCGTGCAAAGAGGATTTTGGCAAATCGTCAATCAGCAGCACGTTCCAAAGAGCGGAAGATG CGATACATTTCAGAACTCGAACACAAGGTTCAGACTCTACAAACAGAAGCTACAACGCTATCTGCTCAGCTTACTCTATTGCAGAGAGATTCTGTTGGAC TCACTAACCAAAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGCAACAGCAGGCAAAACTCCGTGATGGTATTTATGTCCTTTGCTTCCTAGTCTTTCA AATTTTCTCCATTTTTATCTTTGGATGGTAAATTAGTTAAACATGTAAGGCATATCTTCTTTTTCTGGCTGAATTTAATGACCAATAATTAATTGTTCAC TTATAGTTTATAGCTTTGTACAAATAGATAACTGCTAAGATCATATTGTATGTAAATGTCCATATTTTCAAATTGCACTTTTGCTTGTGGCATTTTGCAA GATTTTGGGTTTTATTGCAATGGCCGGATTATATGCACTATGATACCATTTCATAACCTCTACCATTTTCACACAATTGACACCGTCGGCAAAGATTGCA TATAATATTGATAATAGTATCTTTTGGAACTTATGTAATAAATGAGAACCGAGAACCGCCGTAGTACTCATGTGACCAACTTTTAATCCTAATGATTTCA TACAGTGAGGTTTAGAGGGTAGAGGGTTTCTCTCCTCTCTCTGCATTTTTATGTGGACTTATATGATGCCCTTTCTGATGCTTAGTTCTCTTCTATGGGA AGTTTTCGTTAAAGGCATCATTGTTTGTCTGAATGATCTTTGCATGAAACATTATTAATTGTAGTTGCTAACTGTAGTACTACTATCTTGAACAATTTGA GTTTTACATGAATACATTGACTGCTCTATGCTGATCACTTACAATTCTCGTATTCTCGTTTAACAGCTCTAAACGAGGCTCTAACTGCCGAGGTTCAAAG ACTAAAGCTTGCCACAGCGGAGCTGAACGGCGATCCGCACCCGCACCCTTCCAGGTCTTGATTCAGCATCATTGATTGGGAAGCCCCTCCTGCAGCTGCA AGATCCGTTAGGTACCCAAGGACACATGAGTAGCAGATGCATCAGGTATAAGCATGGGTCTGGGTCCAAAAGTGAAGCAACGAGACTGGTCTAGATAATA CACTACACGGACCCAACCAGACTCATTGTCATCCCTACTCTTAGAGTAACTTGATCTCCCCTAATAAAAAATACAGTTTCCTCCTATTTTAATTTTATCA CCGGTTAGTGTTTGTCATTATATTTCAGTTTTAATGAAAATTTTACTCCCATTAATTTTGCTAGACCTTCAGCCCCGGTCCATTGGTATTGAAATAGTTG AGTTTCCAAGGACAAACAGTTTGTAAATAGTTGAGTTTCGAAATCATGGGTTCCATTGGGGAGGAATGAAGTGAAAAAGGGTTTGGAATTATCTTATTAA TGTATTTCATGATTATCAAATTTTTGTTTTTTCCCTTTAAAATTGAACTCACAAACACCGAAAATATTTGACCTGGGCACATTGTTTCCTACTTGAATGA GCGCAATAGTGGATGCTTGTGGGGCAAAAGAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_167548; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466312
| Blastp | Transcription factor RF2b from Oryza sativa with 73.74% of identity |
|---|---|
| Blastx | Transcription factor RF2b from Oryza sativa with 73.74% of identity |
| Eggnog | Transcription factor(ENOG410YGG3) |
| Kegg | Link to kegg annotations (4332761) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014524330.1) |
| Pfam | Basic region leucine zipper (PF07716.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |