| Id Trinity | TRINITY_DN49231_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_468023 |
| Sequence | CTAGTTTTGATCCATATGATTCATGGCCAATATAACTATTAAACCATATCGATATTGGAATCGACTTACCATAATACTCCTATCTCCATTACAGGTATCT TCTTTTTGCAGATAGCCAAGGCTCTATTTTCGGGTGGTGACAACTCTGTTTTGGCGTGTTTCCTTTGTTTCTCGCCACTCTCTCTCAAACTCATTCACCA TCAATGACTCTCTCAATCTCATCCTCTCTCACTCTCCATTCTCACTCATTCTTCAACCATCAACATCAACAACAACGCTCTTTCACCACCTCAAACGCCG TCGTATGCTCCGCTAAATCCGCCTCTCCTCCGAAGCTCAGCGCCGCCGCCGCCGCCGCCGCCGCTCGAATTGAATCGCTGAGTCAGGTTTCCGGCGTGTT GGGTTGTCAGTGGGGCGATGAAGGAAAAGGTAAACTCGTTGATATCTTAGCACAGCATTTTGAAATCGTTGCTCGCTGTCAGGTATAACATACTCTTCTT TCTCAAGTTTATTCCTTTTCACCTTTTTATCCATTTTCTGTTTGCTACTAATCATGGGTAGTTTTGCCAACTCAATGAAATTATTTAAAAAATCACGGGT TAGTGTTTATTTTATCAGCAATTTTTTAGAACGTAAATTTGTTAGTACGTTAGTATTTTCGATGTGGTGAGACTCAAACACACAATCTCCTACACTCTGG TGCTTAAGACCACCATCTTCATCATCAAACCACCTTGTGACTCACAATCATAGGTTAGGGTTGAAACTTGAAAAAGAAACTCTATCTTATACCATTACCA ATAAGGATCCTAAGATAGACCAATTAAGGGTTCGATTCCTATTATCGATACTTGTTGGGAGGTACAATCACCTATCCTGAAAATGAATAGTTTCTAAACA TTAGTCACAAGTGAGGAGCTCATTTCCTACGAAATAAGGTCTCGGGTTTGAGTCTTGTGAATAATGAAAAAAAAATAGGTATTGAGAGAGCTTTGCTCCT TAAATGGTCTCCCTCACTCAACATTGACTATTCATGTTCAATTTGATTTTGCAGAGCGTTTAGAACTACAAGATCCATTTTTACTGGAGAATAACTATAA CTCACATTTGAGGTTGCTTAACGGGATCTCACCGCCCTCGAGGACTAATGAGTTTGATTCTAAGGAACTAATGTGTCCGGTTCTATATTCTTGCGGCAGG ATTCGGGGGGTTTAGTTTCAATTTGTTCACTTGGAGTTCACCTGTGACCTATTGTAGAGAAGATCGTATAATCTCGCCTTAGATGGTTAGAGCATATGTA TGGTACAAGCCCTAGTAAGAAATGGATTATATAGATGGAAGAGAGTGCAATAGTTAGAGGTAGAGGGAAATCAAGAAAAGTTGTAGTTGAAACCATTAAG ACGGATTTTAGATTTAAATAGTTTGTCTATAGATGTGATTTCCGGTAGGATATTATGATGTCATTTGATTGTCAGGGTTTTAAGTTGTGGCCCGATGTGG CCAATGCAGTCTGTAATCATGGTCTGTTGTAGTTCTGCTGGCGGGCACATCATGTAATGTGGTTTGCATTTAAACATTGATCCATGTCTACTTCATGCTC ACATACTTCTTTAATTCTTGTTATGTTGGTTTATTTAAGGTGGTTGTTGATTTTACTATGGTCTGTTTAAGACCCCACTTTCTAGCTAAATAGATATGTA TTAGTCAAAGCTTTTATTTAAGATTTTGGAATTATTCGGATTCTCTGTACATTTATTAGTGGGCTAATGATTCTGGAATTATTTTGATTCTCTCTGTGCA TTGATTTGTGGGCTAATTAACATTATAATGCATGAGTTGTGATCTTTAGATAATTGCTTTCTATTGGTGTTTGTGAATGAATTTGGTCACTCCCCTCGTC TTTTTGTCTGTATTATTTGCGCTGAAAATTTGTGATCATGTGTATCAGGGTGGAGCTAATGCTGGCCATACCATTTATAATTCGGAAGGGAAAAAGTTTG CCCTTCATCTTGTTCCATCTGGTATCCTTAATGAGGATACGCTGTGTGTTATTGGAAATGGAGTTGTGGTGCATCTGCCTGGGCTCTTTCAAGAAATCGA TGGCCTTGAGTCAAATGGGGTTTCTTGCAAGGGAAGGATATTGATATCTGACCGCGCTCACCTGTTGTTTGATTTCCACCAAACAGTGGATGGGCTGAGA GAATCTGAGCTTGCTAAATCTTTCATTGGCACAACTAAGAGAGGCATTGGACCGTGCTACTCCAGCAAGGTTAACCGTAATGGCATTAGAGTAAGTGACT TGAGGCACATGGATACTTTTCCTCAGAAGCTTGATCTTTTGTTATCGGATGCGGCATCAAGGTTCAAAGATTTCAAATATGGTTCAGACGTGCTAAAAAA AGAAGTTGAAAATTACAAGAGATATGCCGAACGATTGGAACCCTTCATTGCTGATACCGTGCATGTCGTGAATGATGCGATAGCACAAAAGAAGAAGATT TTGGTTGAAGGAGGTCAAGCAACCATGCTTGACATTGACTTTGGCACTTATCCCTTTGTTACTTCATCTAGCCCTTCTGCTGGTGGGATTTGCACTGGTC TCGGTATTGCACCAAGAGCTATCGGTGATTTAATAGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCTGGTCCTTTCCCGACAGAAATGTTGGGTCC AGGAGGTGATCTCCTTAGATTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCTCGACGCTGTGGTTGGCTTGATATAGTTGCCTTAAGATTCTCC TGTCAGATCAATGGTTTTTCGTCCCTGAATCTCACCAAGCTGGACGTTTTATCAGATCTCGATGAAATACAGTTAGGTGTTGCTTATAAGCATGTTGATG GCACCACAGTCAATTCATTCCCTTCAGATCTCCGTCTTCTAGACCAATTGAAGGTTGAATATGAAGTACTTCCTGGATGGAAGTCCGATATTTCTAAAAT TAGAAATTATTCCGACCTTCCAAACGCGGCGAGGCAGTACGTGGAAAGGATAGAAGAGCTTGTTGGTACTCCGATCCACTACATTGGTGTTGGGCCGGGA CGCGATGCTCTCATATATAAATGAATTCACATATGCCTCTTCAGGCAAGTTTATGTTTTTCACCATAGAAGTATTTTTTTGCCACTAACTTTCACAGATT TGAGATGATAATGAATTTGTAGTGAATGTTGAAAATTACCTACTTGATGTATTATGTTGTTATCCATCATCAATGCAATTTTTTTGGTTTCTGGGTGAAT TTGATGGTGCAATTTCCCCCCTTTAATTTTGCAGTAGTTTCAGAAATGTTGAGTTGTTAGAGTAATTCATGAAGTATATGTATGCTGAAAAATATGACCT TACTTGTATCAATGTCGCAGAAATAATGTTGTAATTTTAGTCATGACCTTTCACTCTCAAAGTATCTCCAAAATTTTGGTTGTTTTTGTTGTATCATTTA CCATCAATTTCACTTGCCTCTGCCTTTATTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167568; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468023
| Blastp | Adenylosuccinate synthetase 2, chloroplastic from Ricinus with 89.03% of identity |
|---|---|
| Blastx | Adenylosuccinate synthetase 2, chloroplastic from Ricinus with 89.03% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (8278953) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456162.1) |
| Pfam | Adenylosuccinate synthetase (PF00709.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |