Ll_transcript_468028

• Id Trinity: TRINITY_DN49231_c2_g5_i1
• Name Transcript: Ll_transcript_468028
• Sequence: ATTGCAGCGAGTCATTTTTTGAGGCATCCCTTTTACGAGACCCCACGAGTGCCCTTCTATTCTATTACCCCAAAACCCAAACCCCTCTCTCTCTCTCTCT CTTCAATCCTGAGTTGTAACCTACTACTCATTTTCTTTTCCTTTAGTCTCTCTCTCTGTTTCTGAGAACCCCACAAGGAAAAACTCACAGTCTCACTTGC TTCCAAACTAAACACAACACTTTGTTTCTATCTCTATCTCTCTACAACCCTACAGTGTCTAATAAAGGGAAAGAAAATAAAGTATGGAAGGTGAGTGAGT GAGTGAATGAATGATCATTTTGTGTGATACCCCAACAAAGAAAATATAAAATAGATTGAGAAAGAGAGTGAGAGAGAGAGTCCCCACCTCTTTCAAGTAA TGGAACTATCAGATTTACAAAACAACAACAACAGCAAGAAGAAGAAGAAGAATGAAAGTATTGATCAGCACCCACCTTCTCAACCTCATGTGGGCCCTCT TCATATCATGGGCTCCATCAACCATCCTTCTAATTCTTCTTCAAATTCTTCTAATTCTTCTTCTCCTTCAACAACAACAACAACAGTTCCTTCTCCACTA CCCAGATCTGAACCTCAACTCTCTATCTCTACCATCCCTAAACGATCCACCAAGGACCGCCACACCAAGGTAGACGGCCGCGGCCGCAGAATTCGAATGC CAGCCACCTGTGCCGCTAGGGTTTTCCAATTGACAAGAGAATTGGGACACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTACAGCAGGCGGAGCCCGC CATCATCGCCGCCACTGGTACTGGAACAATCCCGGCTAATTTCTCGACCCTCAACTTGTCGATTCGCACCAGTGGGACGACGCTGTCGGCTCCGGCGTCG AAATCGGCACCGCACACGTTTCATGGAGCGTTGGCACTGGCTCACCACCACCCTTATGAGGAAGCGTTCCATCACACAGCGATGTTAGGGTTTCAGCATC ATAGCCTGTTAACCGGTGAGCCAATTCTTGGTAGCAGTGGTGGTGAGTCGAGCGAGAACTATATGAGAAAACGGTTCAGAGAAGATTTGTTTAAAGATGA TAGTAACAATTCGCAAAATGAAAATGATCATGATGGTAATGCTTCTTCACCAAAACATTTCAAAACAAACATATCCCAACAACAACAACAACAACATCAA GGTGGTGTAGTTTCTTCTCTTCGCCCTTCAAATATGTTACCTGCAACTGCCATGTGGGCTGTGGCGGCCCCACCCACAACCACCACAACTCCTCCTCCTC CGCCTGGTAGTACTATTTGGATGCTTCCTGTTGCTGGTGGCACTACTTCTGTCACTGCTGCTCCTTCTTCAGATACACATCAGATGTGGCCTTTTACCGC CTCAGGTAGCGGCGGCGGCGGCGGCGGTGTGAATCCAGTGCATTTTATGCCAAGGTTTAATCTCCAAGGTGGAGGGGTTGAATTCCAAGGTGGAGGACGA GGTGGTGGAGGAGGGGGTGCCCTACAATTGGGTTCCATGTTAATGCAGCAACAACAACAACAGCCATCTCAGCATCTTGGGTTGGCTATGTCTGAATCAA ACTTGGGTATGTTAGCTGCTCTCAATGCTTATGCTAGAGCTGGTGCTGCTTTGAACATGAATTCTGATCACCAAAGTCATCATCACATGGAGCAGCAGCA GCATCACCATCAACACCAACACCATCATCAATCTCATGAACCTGCTGATAGTGGAGAAGATGGTGGTCCTGATAGCTCTCATTGAATGTGAACTTAATTG GTTAGTTTGGCTTTTCGTTTGTAAATAATACCTTCAATATGTATATTCAATCCCAAGGTTTTTAAATTATGGTTGGGTTCGCGGCAAGATGACCACAAAA ACTGCAATATTACCGACAATTACAAGAAGATGTGGTCAAAGTTACCTCAAATTCGACAATCCACAACTACATTATTGCGATTACCGGCATAGTTTACAAC CTTTTTTACCCCTTGTATTTTTTTGCATTGTTGTGTATTAAGGATGTTTGGGTTGTTTTTTTGCAGATTGAAAGTTGAATTTATCATAAAGTGAGTGCTT TGAAAAATGCATGGATGCTTCATCACAATTTAATTTCTTACACCATGTTGCTCTACTCATGCATTTCTTTCTTTCTTTCTTCTCTCCTTCTCTTTTGAAC ATGTTGATTGATCTTTAGTTTAATTTGGAGGTTTTTGGTATGTGATTGGTTAATTTACAGTTTGATTTTGGTCCAAAGGGACATAGCAGACTTAGAGAGT TTGATTGTATAGGGAGGTATATTTCTCATGATATTATTATTTACTTGTTTATTTTTTCTTTCTATGTATAACAGTTTGAAAACAATTAAAACTCAACGAT TTACGGTGAAAATTTCGATATCTTCCTTCTAAAAAAA
• Tissue: pods
• Gene name: LI_gene_167572;
• Additional information: details;

Expression of Ll_transcript_468028

FPKM

• PAB: 3.2
• PNAB: 6.8
• PS1: 13
• PS2: 8.7
• PS3: 9.1
• PW1: 5.4
• PW2: 4.7
• PW3: 2.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_468028

• Blastp: Transcription factor TCP8 from Arabidopsis with 47.57% of identity
• Blastx: Transcription factor TCP8 from Arabidopsis with 63.58% of identity
• Eggnog: Transcription factor(ENOG410YBA4)
• Kegg: Link to kegg annotations (AT1G58100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426347.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;