Ll_transcript_466598

• Id Trinity: TRINITY_DN49234_c2_g1_i5
• Name Transcript: Ll_transcript_466598
• Sequence: ATTATATTGATATGGATTGGAATAAAAGAAGATGAAGGAGAAATATAGGATTAAATTAAATTTAGAAATTTGCGAAACGGTCCCTTAATAAGAGAGGAAT TGTTTATGGAGAGAAATGTAGTGTTTAATATATATTTTTGACCTAAGAGCGTTTTGTAATTTGTAGTGAATTATTTAAAGGAAAGATAAAGGCAAAAGGA GGAAGCAGAGAGAAAGGAAGGAACGATATATAATATGTGTGTGGGGTTGCAGCGGTCAACAATCGTTGGGATTCCGTAGTCCAAAGCACAGCAAAGAGAT CAAGAAGGAAGGAAGGAGTGGCAGATTGGATTGCTAAGTGTGCCGTGCTGTGGTGTGGTTTGAGAGAGATCGATCAATCACTCAATCAATCAATCGATTA ACCACTCAATCAATCGATCAACCAATCAACCAATCAATCGATCAATTAACTAACCAATCAATCCATCGATGGTGAAAGAAACCGAATTCTACGACGTGCT GGGTGTCAGCCCCACCGCATCCGACGCCGAGATTAAGAAAGCTTATTATGTCAAGGCACGCCAGGTGCATCCTGATAAAAACCCCAATGACCCTCTTGCT GCCCAAAATTTTCAGGTGTTGGGTGAGGCTTACCAAGTTCTGAGCGACCCAGCTCAAAGGGAAGCTTATGACGCTCATGGCAAATCAGGAATCTCAACTG AAGCAATTATTGATCCTGCAGCAATCTTTGCCATGCTCTTTGGTAGTGAGCTTTTTGAGGAATATATAGGCCAGTTAGCCATGGCTTCAATGGCTTCCAT GGACATTTTTACGGAAGGGGAACAATTTGATGCAAAAAAGTTGCAAGAGAAGATGAGGGTTGTTCAGAAGGAGAGAGAAGAAAAGCTTGCAGAGATACTG AAAAGTAGACTTAACCAATATGTTCAAGGAAACAAAGAGGATTTCATTATTCAAGCAGAAGCTGAAGTAGCCCGGCTATCCAATGCAGCTTACGGTGTTG ACATGTTGAATACTATTGGCTACATATATGCAAGGCAGGCGGCAAAAGAGCTAGGGAAGAAAGCCATTTATTTGGGTGTGCCTTTTATTGCTGAGTGGTT TAGAAACAAAGGGCACACTATCAAATCCCATGTAACAGCGGCAACAGGGGCAATTGCTTTGATCCAGTTACAGGAGGATGTGAAGAAGCAACTCACTATG GAAGGGAACTATACTGAAGAAGAGCTTGAAGAATACATGCAATCTCACAAGAAATTAATGATTGACTCTTTATGGAAGCTTAATGTGGCCGACATTGAGT CCACTCTCTCCCGTGTTTGTCAAATGGTTCTCCAAGACAACAGTGCTAAGAAAGAAGAACTTCGAGCACGAGCAAAGGGGTTGAAAAGTCTGGGTAAAAT CTTCCAGAGGGTCAAGTCAGTCGATGTGAATGAGAATGGAAAAGTATCAAACGAAACGGTACATAAGTTGAACGGAAGTGAAAGTAGCAATGATGCTTGT CCGGCTAGTAAATCACCTAAATCTTCAAGTCCTGATTTTTCTGAGAGCCTCTACGTGGAGGCCCCACGCTTTGGCGGCATGCAATTCGACTATAACTTCC CTAGGCCAACCGCCCCCCCAGGTGCCCAGAGACCTCCAACCAGCAAGGATTGATTGATTGAGAGCGCATACCACCTATTGTATGTATGGTATCTTGTGGG AGATGCCTGTACAAATAGATAGTGTCGTTGTGATTTATGCATGTCTACTAATTCTATTATGTATACTTGTGATTGGCTGCCATTTAATTCGAATTGTGTA TTCTATTGGGGTGTTTGCAGTTATGCTTCTTTTTTCCTTTTCTCTTTCCAAGCTAGTGGAATGTCTACATTCTTCTATAAAAACTTATTCTTTAGGATTT GGAATATCTATAACACGTAGTCATTATATCATGTCCATTCATTTGTATTATTTTTTAAGAGTTGATAATTATTGAAAATGAATACATTAATA
• Tissue: pods
• Gene name: LI_gene_167587;
• Additional information: details;

Expression of Ll_transcript_466598

FPKM

• PAB: 14.5
• PNAB: 11.2
• PS1: 16.7
• PS2: 8.3
• PS3: 12
• PW1: 12.4
• PW2: 12.1
• PW3: 12.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_466598

• Blastp: Chaperone protein dnaJ 10 from Arabidopsis with 73.96% of identity
• Blastx: Chaperone protein dnaJ 10 from Arabidopsis with 73.37% of identity
• Eggnog: DNAj domain protein(COG2214)
• Kegg: Link to kegg annotations (AT1G76700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423124.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: -