| Id Trinity | TRINITY_DN49239_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_466731 |
| Sequence | CAACTATTACAACAACCTCATCAATGAGGTGCTAGCCAAAGGTCTACAACCATTTGTGACCATTTTTCATTGGGATCTTCCTCAGGCCCTAGAAGAAGAA TATGGTGGCTTTTTAAGTCCTAGCATTGTGAATGATTTTGAAGACTATGCAGAGCTATGTTTCAAGGAATTTGGAGATAGGGTGAAGCATTGGATTACAT TGAATGAGCCATGGACATTCAGCCAAAATGGGTATGCACTTGGTGTGTTTGCACCAGGAAGATGTTCAGCTTGGCAAAACCAAAATTGTACTGGTGGAGA TTCAGCCACTGAACCATATATAGTGTCTCATCACATGTTACTAGCTCATGCTGCTGCTGTCAATGTCTACAGAACTAAGTATCAGGTATTGTTATATATT TTCCACTTTCAAAACCCAATTTACAAAGGAACATTATGCATATAATGGGTTACCTATGTTGGGTATTCCAAGTGTTAATGAAGAAATCTTACATTGTGCA GATAAGTTAAAAAGTATATAAGTGGATGGACACTTATAATACATAGTCTATCTAAATATATAACAATATTAACTAATAGCTATGTTTTCATTTTTTATTG TGTAAATAGACTTCTCAAAAGGGATTGATAGGGATAACACTAATAGCTGATTGGTTTTTGCCACTAACTGATACAAAATTGGATCAACAAGCTGCTCAAA GAGCCCTTGATTTCATGTTTGGATGGTATATGGAGCCCTTAACAAAAGGGAGTTACCCAAAGTCCATGCAGTCTCTAGTGAAAAATCGATTACCAAAGTT CTCTTCAGATCAAATTAAGCTACTTATAGGATCCTTTGATTTTATTGGATTAAACTATTATACCTCTTCTTATGCTGCCAATGCACCTCCATCAAGTGGA TTAAGACCCAACTACCTCACGGATTCTCATGTTAATCTTTTAAATGAGCGTAATGGAACAAGTATTGGCCCAACGGCTGCTTCTTTCTGGTTGTATGTTT ATCCAAGAGGAATTCTTGATGTGCTCCTTTACATCAAGCATAAGTACAATAACCCTGTAATCTACATCACAGAAAATGGTGTGGATGAGCTAGATGATCC AAATCTCTCCCTTGAAGAAGCACTTAATGATACCTACAGAATTGATTACCATTATCAACATCTCTATTACCTTCAAATTGCAATCAAGAATGGCGTGAAT GTAAAAGGATATTTTACATGGTCATTGATGGACAACTTCAATTGGGATTCAGGTTATACGATGCGATTTGGGATTTACTTCGTAGATTATAAAAATGGGC TGAAAAGACATCCAAAACTCTCAGCCCATTGGTTTAAGAATTCCCTACAACACAGAAAACTTGATCTTGATGATTCTGGCTAATTAGGGCAACTTCATAA TTTTAAGTGTGGCTTGAATCATATGATTACATGCCACAAGCAATGGATCATTGAAAATAATTGTCTCATCAAATTCACATTATTGTAAATTACCTACTTG CAATGTTGGATTAAGGCACCATGGCTTTAATTTCAATTGATTTTTATGAATATTATTGAAGATTTTAATCTAATTAAGTTTGTATTAATTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167625; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466731
| Blastp | Beta-glucosidase 12 from Oryza sativa with 70.54% of identity |
|---|---|
| Blastx | Beta-glucosidase 13 from Oryza sativa with 60.41% of identity |
| Eggnog | beta-glucosidase(COG2723) |
| Kegg | Link to kegg annotations (4336145) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436806.1) |
| Pfam | Glycosyl hydrolase family 1 (PF00232.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |