Ll_transcript_467692

• Id Trinity: TRINITY_DN49240_c2_g1_i11
• Name Transcript: Ll_transcript_467692
• Sequence: CGTCATTGTTCATATTCAATGGTAAAAACCCCACTTTACAGAAAACCCCAATAATCAAAATAGCATAATGTGTCATCAAGACAATAACTTTATTCAAAAA TTAGAGACCAACGTGGCAAAATACAAATGGGTTCAAACAAGGATCTTGATAAGGAAAGGAAAAGAAGATCTATTGTATACCTTTTTTTATATTTGTAATG TTTACTGATTTTTGTTTATCACTACCTACACTTCGGATTTCACTAGTAAATCAATAAATTATTTGTTTTGCTATTGTAAAAGAAGCAACGGTGTCGTATT GAGTTTGACCCATGTCAGTTACTGTGCTTGAACTTCAAGCGGCGCGTGGCGCGTGAAATTAACTACCCGTCAAAACCAGCACATTACATTGTGGAAAATT ATCTCCTCTAAACCCCAGAGAGAACAAACAATTAGGGTTTATCAAATTCAATTTTGGGTCTAATTTTCACTTACATACACTGTACCCTTGCCCTTGAATT TTAATACATACAGGAGGAGGTTGCTGTGTTGTCATGCTTGATTGAAATTTGCAAAATGAGTGATTCAAAAGAAAACGAGGAAGGCTGCCAGAGCATGCCC GTGGCCATGGAAGAAAGCCACCAGTTGGTTGATTCAGAGGTTCAAGTTGAACCCAAAGAACCTTCATCTAAAGATGCATTAAATCACGTGGAAACCGGAA AGGAAGAGCCTCTCGCCGAGGATGAAAATGTTAAGGCGGGGAAGGCAGAGCCTCACACCGAGAATGAAAATGTGAAGGCAGGGAAGGCAGACCTTCTTGC TGAGGATGAAAATTTGAAGGCAGGCAAGGCCAAACCTATTATGGAGGAAGAAATTATGAAGCCAGGTGAGGCAGAGTCGATTGCTGAGGATGAAAATGTG AATCCAGGGAACACAGAGCCACCTGTCAAGGATAACAGCAAGAAGCCAGTAAAGGCACAAGTACCTATTGACGATAAAAGTGTGAATCCAGGAAAGGTGG AGCCATCTGCTGAGGATGATAGCGAGCAGCCAGTAAAGATAGAGCTTCCCGTTGAGGATAAAAGTTCGAATGCGGAGAAGGAAGAGCTACCTGTTGAGGA TAAAAGTTTGAATGCAGAGAAGGAAGAGCTACCTGTTGAGGATGATAGTCTGAAACAAGGGAAGCTAGAGGTACCTGCTGAGGATAACTGTGTGGAGCCA GAATCTGTTTTAGGGGACATTCGTCAACAAGATGTTCAAAATACTCTTCAGTCGGCCTCAGTTGAGTTTGATACTCCGATTTCAAATAAAATTGAGTGTG AAAAGGCTTCTAATGCGAATGCGAAAGCTGATGAATTTCCTCAGGGTAATATGGACGTCAAGAATGATGGTAGCAGTTGTCGAAATAATGTTGATGCTGC TGAGACAATGATGGAGGTGAAGCCTGAAGCCCATGAAGTGATTGATAGTAAAACTTGTGATAATGTGGACAGCATAGCCAGTCATAATGAGCCTACTACA CCACAAGCTGTTCCGACAGATACAAAAGCTGAGATCAAGAATGAATTACAAGTTGCAAATAAGGGTGATGGAGAGCAAGCTGTTGAACCTGGAGATAATG GGAACTCGAACTCAATGCAGATATCCTTCTTGAACGCTGACCATTGTTATGATGGTAATGAGTCAGGGACAGATGAGGAGCAATCAACTTTTATGAAGGA GCTTGAAAATTTCTTCAGGGAAAGGAGCATGGAATTCAAACCTCCCAAATTTTATGGAGAAGGACTCAACTGCCTTAAGTTATGGAGAGCTGTGATAAGA TTGGGTGGCTATGATAAGGTAACCTCATGTAAGTTATGGCGGCAAGTGGGAGAGTCTTTCAAACCTCCAAAGTAAGGACCAACTCTTGATCTTATTCATG ACTTTAAATTTGGAAACTCTCTTCATATGGGCATTCCGTGCTTTGTGTCTCTTTAATCACTATTGGAGGTCAAAACTGTGATTCCTTTCTGTCTATTATG CTAATATTAATGCCACCATGCAATTATAGTTTGTATCGGAAAGGAGTTCAAAGATTTTGAAATTTCTTTGTCACACAGGTTGATTGATTTCCATATTGAT AGGAAGACACAAATTTAAACCAGTTGTCTTCATTATTTAAGATATGGACTACTGGCAGTCTTTCAATATATCTTAACTATTTCACCCAGGTTTAGTACCT TTCGATTTTTTCAACCTATGCAGGACATGTACCACAGTTTCATGGACTTTTAGAGGATTCTATGAGAAGGTGATTCTAGATTAATAAATTACAACTTAGC TTTTGGTGTTTTAGAGAATTGATTTTACAAATTACTACTATAGTTTATATCTGGCTTGCTTGATGTTCCTTTTAAAGCTAATAAGTAGGCCTTTTGTTTT AGACATGAATATAAACTCTCAATTTGCATTTACCCAAATTGCTTGGGCAATTTTTGCGTCACCATACCTTTTTTGGTTGGTAAGAAGCATTTAGAAATAA TTTCATATCTTTTACGTACTGGATATGTACCAAACTTTACATGTATTACATTTATAGTTAGTGGTGATATTCAATTCATGAGCTACATTTTGTGTTTCCC CCCCTCTTGGTATTGGGTGGACACCTTTATTGTTTGAGCTTCAAAATCTACCCAAAGTAAATATATTATTATCAGTCTTAAAATCATGAATAAAAAACCT GTAAAATTCAGTGTCACAAATTAATGAAAATAAATCCCACCCCTAAAATTTACAAGGTCATGTAATAGCATAGGCTTATTCCATTAGTATTTGTATTTGC AAAACATAAGAAAACTATGCCAGATATTCTGCCTTTAGAATCATCCACCCTACTGGCCTGTCTTTTTAACCCTTCAGTATATTGCTGTGCCTACTTTCTT GTGTTCTACTCCAGGCACTTCTTGATTACGAAAGGCATAAAATAAATGGTGGCGAGTTGGATATGCCCATTGCTGCTGCTGCTGCTGCTGCTGCTTCTGC TGCTTCTCACCCAGAGCCTGTGAACATTGAAAATCAGGCTTCAGCATCAGGTAGAGCACGAAGAGACGCTGCAGCACGGGCTATGCAAGGTTGGCACTCA CAACGTCTCCTAGGCAATGGAGAAGTTAGCGACCCTATTATTAAGGATAGGAATTATGCATCTATGCAAAAGCGTGAAAAGCAGCTTAAAAGCATCAATT TACTTAAACGTAAGAAACCATCTTACATGGATAATGCAGTCAAAGCAGCTAGAAGTAAACCATCTAAACCACAATTGGACACTGCTGTGGTTGATATTGG ACCCCCTGCTGATTGGGTAAAAATCAATGTTCAAAAAACTAAAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAGGTGCATGTT CAATCGGACCCAGCGGGACGCTTGGTCATAAGTGGTGAGCCTGAGAATCCTGATAATCCCTGGGGTGTGACACCTTTCAAAAAGGTTGTCAGCTTGCCCT CAAGAATTGATCCTCATCAGACATCTGCTGTCGTGACGCTGCACGGACAGTTGTTTGTTCGCGTCCCGTTCGAACAAGCAGAATAGTGGTTGCAGATGCT TTCATGCCAAACCTCCCTTTATACCATAAATTCATAGGTCAATTATTGATCCATAAACCATTTAGAGGAATTATTTATGCCCATTAAGACTCTCCAATCT CTTACTGTTGTGGTACATAGTTATATTATGGATATTCACATTAAAATCTTCATGCAACTTGGATAATGAGCTAGGTAGGACTCTCATAGCTCTGAAGACC ATGTCATATTATTGGGACCTTGGATAATGAGATTACATTTAACATTTAACTGTGGATCTTTTATTTGTTACATCTCTATTGCATCGAATCTTATGCATTT TCTAC
• Tissue: pods
• Gene name: LI_gene_167630;
• Additional information: details;

Expression of Ll_transcript_467692

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0.5
• PS2: 0.4
• PS3: 0.4
• PW1: 0.1
• PW2: 0.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467692

• Blastp: AT-rich interactive domain-containing protein 3 from Arabidopsis with 80.72% of identity
• Blastx: AT-rich interactive domain-containing protein 3 from Arabidopsis with 68.61% of identity
• Eggnog: At rich interactive domain(ENOG410Y2AP)
• Kegg: Link to kegg annotations (AT2G17410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445144.1)
• Pfam: ARID/BRIGHT DNA binding domain (PF01388.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;