Ll_transcript_467680

• Id Trinity: TRINITY_DN49240_c2_g5_i1
• Name Transcript: Ll_transcript_467680
• Sequence: ATTGATTACACTTATGCTTTCTACTTTTTGATTTGGAGTCCAAAAAAGACATTCCAATGTTATTATGATTATATTCTCAAATATAACATATGAATATTGG TTACATGCTTGATTTTCATGATGAAAAAATAGAAAATTAGTCCACATACTTCAGGATGTTCTTGGACAGGATTGTCTCGAGCATGTGGGAAACAAAAATA TTCTCAAACATAAAAAAACACAGCTTATTATCTTGTCTCTCTGCACTTACTCTCCGATCTCTTTCCCCTTCTTCTTCTACTTAGGTTTCACATTCTGCTT CAACTTTTGAATTAGGGTCTCCCAAATCCCAATTTTCCACACCAAGTTTCTGTTTCGTTGACCCTTTTCTGTAAAGTTTGCAATTTTGGTGAACGCACAA GTTTATCAATTCGGATTTTTCAATCTCCGATTACTAGGTTTTGAACTTTAACGCTACATTAGAGCTATAGGGACTTGAAATTCGTTTTGTCCCCGCTTGA TTTTTTGGTTTATTCCTCAAAGGGTTTCGGATTTTACTATTTATATAGTCAATGATTCACAATCTAATAGGTTCCCCCTTTTGATTATCTAGGGTTTAAT TATGTTCAGCATGATTTTGAAGATTTGAAATTAACCCTAGAAGTTTGTATTTTTTGTAGTTGGTTGGTTTAATTATTTGAGTTTTATTTATTGGATCTTG AGTTGTGAAATTGAGCATGGCCTCTTATAGGCCTCTTCCTCCTTCACAATCATCATTTGTTGCACAAAATCAAAACCCTAATGCACCAGCACAAACCCAA CAACATGGGAATTGGAAATATGGTGGAGGAGTAGTAGATGGGAGTGTGAATTCTTCAGCTCCCTCTACTTCATTCCCTCAACAAGGTGGTTATAACCAAA TGCCCCCAAATTCTAATTTTCAGCATCCTTATCAGCAATATCCATATCCACCGCCGCCGGCACCTCCCGAAACTTCATACCCTGCACCACCACCACCTCC TAATGCTCCTCCCATGTATTATCCTCCTAATCATTATTCTCAGTATGATAACAAGCAACCATTGCAGCCACCTCCTCCACCACCACCACCACCACCTTCT TCGCCGCCACCTAGTTCTTCTATCCCTCCACCACCACCTCCTAGTTCACCACCTCCCCCTCCCCCTCCAGCTCCTATGCAAAGTCGAAACAACGATGAGA GACGACCATATGATCGCAATAAAGGGCCTGTGAAGGAGACTTCGGCACCTGGTAGATGGGAACATGAGCAATCAAGTCATGGGCATAAACATCTGAAGCC TGCTGCTGTTCCTCCGATGCCAATAAAGAAACCAAACGCGCCTCCAGGGAGAGCTGAAACAGAAGATGAAAGGAGGTTAAGGAAAAAGAGAGAATTTGAG AAGCAAAGGCAAGAAGAAAAGCATAGGCATCAGGTAAAGGAGTCACAGAATAGTGTACTGCAAAAGAGTCAGATGTTATCATCTGGGAAGGGGCATGGTT CGGTCATAGGTTCGCGAATGGGAGAGAAGAGAAATACTCCCTTATTGAGTGGTGAGAGGATTGAAAATAGGTTGAAGAAGCCCACAACGTTTCTGTGTAA GATGAAGTGAGTATGTTGCATTAATAAATTCTTTTTAGTTCTTAACAATAGTTACTGTTTCTTCTGTGTTCTGTGAGATTCCAGTTTCAAATTACGTCTT GTCTTTCGCATTATGTCTTCTGAGTTTGATTTACAGTTTATCAGTGTTAGTAATGATTTCAATATTAACACCTTTTTACGCATGCTTTCATTTAAGATTC CGAAATGAACTTCCAGATCCAAGTGCACAACCCAAGCTAATGGCGTTCAAGAAAGAGAAAGACCAGTATGTAGTCTTATTCTCATGTTAATATTAGTATG TAGCTAGCAAGAATTATCTAGCCACTTGATGGGGTAGTCAGCAGTGTCATTGATTTTATGATGTTATGCTATTGTTTTTCCCACTTATCGCTGCATTTTT TCATCATTTTGGTAACTGATAAATGTTCAGGTTGTAGGAAGATGAAGAGGAAAACTGACACTTCGGTAGAGATCTGGTAACCATATAGTGGGTTAATATG ATATTGTAGGCAGGAAGTGTAGTTCTGGTATTAGACGAGAATCATGAGATATGCTCTGCAAGTTATTCAATGTAGTACTATTCTGCGTGAGATAGAGCAT ATATGGAGTGAGATAAATGATTCTGATTAGCTTTTGCATGAAGTTTCGAGGCTTACGACCATTTGGTTGTTAAATGGCTACTTTAAAATGCTTCACCAGT TAGTCTTTCAATGTTGGCCGGTTATGCAGGATTCAGTGGTTAAGACTTATGACATGCTTTTCTTACTCCTCATATTAAAGACTGATTTTTATTGGGGAAC AATATTTCAGGGATGCTTCCAAAATAAATAGTTTAACTTTGCTTCCCTTTGTCTTGCTTTTTCTCTCTCCTGATTTTATGGTCATTGTGCAGATATGCCA GATATACAATCACATCTCTAGAGAAAATGTACAAACCCAAACTTTTTATGGAGCCAGATCTTGGGATACCTCTTGACCTGCTCGATCTCAGTGTTTACAA TCCTCCTAGTGTCAGACCACCTCTTGACCCAGAAGATGAAGAATTGTTACGAGATGATGAAGTCATTACTCCTATTAAAAAAGATGGCATAAAAAGAAAA GAAAGGCCCACTGATAAAGGTGTTGCTTGGCTTGTCAAAACACAATATATATCTCCTCTGAGCATGGAATCGACAAAACAGTCTTTAACTGAAAAACAAG CAAAGGAACTAAGAGAGATGAAGGGAGGCCGCAGCGTTTTAGGAAATCTTAACAGCAGGGAAAGACAAATAAAGGAAATACAAGCATCATTTCAAGCAGC TAAGTCACACCCTGTTCATGCAACTAAGAAAGATTTGTATCCTGTTGAGGTTCTGCCTCTGCTACCTGATTTTGATAGGTATGATGATCAGTTTGTTGTT GCAGCATTCGATAATGCTCCTTCAGTTGATTCAGAAATGTACAGTAAGTTGGACAAATCTGTTCGTGATGCCCATGAATCAAGGGCAATTATGAAAAGCT ATGTTGCATCTAGCTCAGACCCTGCAAATCCTGAGAAATTTTTGGCATATATGGCCCCAGCACCTGGAGAGCTGTCAAAGGATATATATGATGAAAATGA AGACATCTCGTATTCTTGGATTCGCGAGTATCACTGGGATGTACGAGGTGATGATGCAGATGACCCAACAACATACTTAGTTTCGTTTGATGAGTCAGAG GCGCGCTATTTGCCCCTTCCAACAAAGCTTGTTTTAAGAAAAAAGAGAGCTAAAGAGGGAAGATCTGGTGAGGAGGTCGAACAATTTCCAATACCTTCAA GAGTTACCGTAAGGAGGAGGCCAAATGTTGCTGCCATCGAACTGAAGGATTCCGGGGCTTATACAAATACAAAGGGCAGTTCTTCAAGGAGAAGGGGTTT AGAAATTGATGATGATATGGATGAGCCACATAGAGTTGCAGAATACCAGGATAATTACCAGTCTAGTGGAGCAGAAGATGACATGTCTGATTGATTCTTT GATGCAGATAGTATTATTGCCTTCAAGCAAATTTTCCTATGAAGTTATGGTTGGATTGTTGGTTTCAGGTAGCTCAATTCCTAGGTGTTCCACTGAAGTA AAACAAATGATAAACACCATATTAACTCTTCCTCATAATTCTATGTAGACAGTTTTTAAATCAATATAGGTTTTCCCTTTCAATACCACTAAAATAGAAA GAAAAAAAGAAGTGAAATAAGGAAATGTAAAAAGCATGTCAGATTAAATGGTATCCTGAATATGGTTTTAGGGAATGTTTGTACACCAATGAGATTGCTG TTCTAATGTTTCATTCATATATGGAAATGTAGTTATCTACTCTAAATGTACACTACGAAATACATTTCCATAATTAAAAAAGGAAAATATAATAATAATA AAAGTGTGAAAGATTCACTTCGTCCAAGTTTAGCACTTGAAGTACTAAACCTTTGTATGCCAATTTTAAAAACTTAAAAAG
• Tissue: pods
• Gene name: LI_gene_167634;
• Additional information: details;

Expression of Ll_transcript_467680

FPKM

• PAB: 0.8
• PNAB: 1.2
• PS1: 0.8
• PS2: 0.7
• PS3: 1
• PW1: 0.4
• PW2: 1.1
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467680

• Blastp: Protein PAF1 homolog from Arabidopsis with 68.63% of identity
• Blastx: Protein PAF1 homolog from Arabidopsis with 71.98% of identity
• Eggnog: paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)(ENOG410YZXE)
• Kegg: Link to kegg annotations (AT1G79730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436460.1)
• Pfam: Paf1 (PF03985.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;