| Id Trinity | TRINITY_DN49240_c2_g5_i4 |
|---|---|
| Name Transcript | Ll_transcript_467697 |
| Sequence | ATTGATTACACTTATGCTTTCTACTTTTTGATTTGGAGTCCAAAAAAGACATTCCAATGTTATTATGATTATATTCTCAAATATAACATATGAATATTGG TTACATGCTTGATTTTCATGATGAAAAAATAGAAAATTAGTCCACATACTTCAGGATGTTCTTGGACAGGATTGTCTCGAGCATGTGGGAAACAAAAATA TTCTCAAACATAAAAAAACACAGCTTATTATCTTGTCTCTCTGCACTTACTCTCCGATCTCTTTCCCCTTCTTCTTCTACTTAGGTTTCACATTCTGCTT CAACTTTTGAATTAGGGTCTCCCAAATCCCAATTTTCCACACCAAGTTTCTGTTTCGTTGACCCTTTTCTGTAAAGTTTGCAATTTTGGTGAACGCACAA GTTTATCAATTCGGATTTTTCAATCTCCGATTACTAGGTTTTGAACTTTAACGCTACATTAGAGCTATAGGGACTTGAAATTCGTTTTGTCCCCGCTTGA TTTTTTGGTTTATTCCTCAAAGGGTTTCGGATTTTACTATTTATATAGTCAATGATTCACAATCTAATAGGTTCCCCCTTTTGATTATCTAGGGTTTAAT TATGTTCAGCATGATTTTGAAGATTTGAAATTAACCCTAGAAGTTTGTATTTTTTGTAGTTGGTTGGTTTAATTATTTGAGTTTTATTTATTGGATCTTG AGTTGTGAAATTGAGCATGGCCTCTTATAGGCCTCTTCCTCCTTCACAATCATCATTTGTTGCACAAAATCAAAACCCTAATGCACCAGCACAAACCCAA CAACATGGGAATTGGAAATATGGTGGAGGAGTAGTAGATGGGAGTGTGAATTCTTCAGCTCCCTCTACTTCATTCCCTCAACAAGGTGGTTATAACCAAA TGCCCCCAAATTCTAATTTTCAGCATCCTTATCAGCAATATCCATATCCACCGCCGCCGGCACCTCCCGAAACTTCATACCCTGCACCACCACCACCTCC TAATGCTCCTCCCATGTATTATCCTCCTAATCATTATTCTCAGTATGATAACAAGCAACCATTGCAGCCACCTCCTCCACCACCACCACCACCACCTTCT TCGCCGCCACCTAGTTCTTCTATCCCTCCACCACCACCTCCTAGTTCACCACCTCCCCCTCCCCCTCCAGCTCCTATGCAAAGTCGAAACAACGATGAGA GACGACCATATGATCGCAATAAAGGGCCTGTGAAGGAGACTTCGGCACCTGGTAGATGGGAACATGAGCAATCAAGTCATGGGCATAAACATCTGAAGCC TGCTGCTGTTCCTCCGATGCCAATAAAGAAACCAAACGCGCCTCCAGGGAGAGCTGAAACAGAAGATGAAAGGAGGTTAAGGAAAAAGAGAGAATTTGAG AAGCAAAGGCAAGAAGAAAAGCATAGGCATCAGGTAAAGGAGTCACAGAATAGTGTACTGCAAAAGAGTCAGATGTTATCATCTGGGAAGGGGCATGGTT CGGTCATAGGTTCGCGAATGGGAGAGAAGAGAAATACTCCCTTATTGAGTGGTGAGAGGATTGAAAATAGGTTGAAGAAGCCCACAACGTTTCTGTGTAA GATGAAGTGAGTATGTTGCATTAATAAATTCTTTTTAGTTCTTAACAATAGTTACTGTTTCTTCTGTGTTCTGTGAGATTCCAGTTTCAAATTACGTCTT GTCTTTCGCATTATGTCTTCTGAGTTTGATTTACAGTTTATCAGTGTTAGTAATGATTTCAATATTAACACCTTTTTACGCATGCTTTCATTTAAGATTC CGAAATGAACTTCCAGATCCAAGTGCACAACCCAAGCTAATGGCGTTCAAGAAAGAGAAAGACCAGTATGTAGTCTTATTCTCATGTTAATATTAGTATG TAGCTAGCAAGAATTATCTAGCCACTTGATGGGGTAGTCAGCAGTGTCATTGATTTTATGATGTTATGCTATTGTTTTTCCCACTTATCGCTGCATTTTT TCATCATTTTGGTAACTGATAAATGTTCAGGTTGTAGGAAGATGAAGAGGAAAACTGACACTTCGGTAGAGATCTGGTAACCATATAGTGGGTTAATATG ATATTGTAGGCAGGAAGTGTAGTTCTGGTATTAGACGAGAATCATGAGATATGCTCTGCAAGTTATTCAATGTAGTACTATTCTGCGTGAGATAGAGCAT ATATGGAGTGAGATAAATGATTCTGATTAGCTTTTGCATGAAGTTTCGAGGCTTACGACCATTTGGTTGTTAAATGGCTACTTTAAAATGCTTCACCAGT TAGTCTTTCAATGTTGGCCGGTTATGCAGGATTCAGTGGTTAAGACTTATGACATGCTTTTCTTACTCCTCATATTAAAGACTGATTTTTATTGGGGAAC AATATTTCAGGGATGCTTCCAAAATAAATAGTTTAACTTTGCTTCCCTTTGTCTTGCTTTTTCTCTCTCCTGATTTTATGGTCATTGTGCAGATATGCCA GATATACAATCACATCTCTAGAGAAAATGTACAAACCCAAACTTTTTATGGAGCCAGATCTTGGGATACCTCTTGACCTGCTCGATCTCAGTGTTTACAA TCCTCCTAGTGTCAGACCACCTCTTGACCCAGAAGATGAAGAATTGTTACGAGATGATGAAGTCATTACTCCTATTAAAAAAGATGGCATAAAAAGAAAA GAAAGGCCCACTGATAAAGGTGTTGCTTGGCTTGTCAAAACACAATATATATCTCCTCTGAGCATGGAATCGACAAAACAGTCTTTAACTGAAAAACAAG CAAAGGAACTAAGAGAGATGAAGGGAGGCCGCAGCGTTTTAGGAAATCTTAACAGCAGGGAAAGACAAATAAAGGAAATACAAGCATCATTTCAAGCAGC TAAGTCACACCCTGTTCATGCAACTAAGAAAGATTTGTATCCTGTTGAGGTTCTGCCTCTGCTACCTGATTTTGATAGGTATGATGATCAGTTTGTTGTT GCAGCATTCGATAATGCTCCTTCAGTTGATTCAGAAATGTACAGTAAGTTGGACAAATCTGTTCGTGATGCCCATGAATCAAGGGCAATTATGAAAAGCT ATGTTGCATCTAGCTCAGACCCTGCAAATCCTGAGAAATTTTTGGCATATATGGCCCCAGCACCTGGAGAGCTGTCAAAGGATATATATGATGAAAATGA AGACATCTCGTATTCTTGGATTCGCGAGTATCACTGGGATGTACGAGGTGATGATGCAGATGACCCAACAACATACTTAGTTTCGTTTGATGAGTCAGAG GCGCGCTATTTGGTATTTCCTGGAAACAATATCTCTGTCTTCTCAACCAATGCGCCGACACATAGTTTCTTGATCACATTCATTTTGTTAATTTGATATG CAGCCCCTTCCAACAAAGCTTGTTTTAAGAAAAAAGAGAGCTAAAGAGGGAAGATCTGGTGAGGAGGTCGAACAATTTCCAATACCTTCAAGAGTTACCG TAAGGAGGAGGCCAAATGTTGCTGCCATCGAACTGAAGGATTCCGGGGCTTATACAAATACAAAGGGCAGTTCTTCAAGGAGAAGGGGTTTAGAAATTGA TGATGATATGGATGAGCCACATAGAGTTGCAGAATACCAGGATAATTACCAGTCTAGTGGAGCAGAAGATGACATGTCTGATTGATTCTTTGATGCAGAT AGTATTATTGCCTTCAAGCAAATTTTCCTATGAAGTTATGGTTGGATTGTTGGTTTCAGGTAGCTCAATTCCTAGGTGTTCCACTGAAGTAAAACAAATG ATAAACACCATATTAACTCTTCCTCATAATTCTATGTAGACAGTTTTTAAATCAATATAGGTTTTCCCTTTCAATACCACTAAAATAGAAAGAAAAAAAG AAGTGAAATAAGGAAATGTAAAAAGCATGTCAGATTAAATGGTATCCTGAATATGGTTTTAGGGAATGTTTGTACACCAATGAGATTGCTGTTCTAATGT TTCATTCATATATGGAAATGTAGTTATCTACTCTAAATGTACACTACGAAATACATTTCCATAATTAAAAAAGGAAAATATAATAATAATAAAAGTGTGA AAGATTCACTTCGTCCAAGTTTAGCACTTGAAGTACTAAACCTTTGTATGCCAATTTTAAAAACTTAAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_167634; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467697
| Blastp | Protein PAF1 homolog from Arabidopsis with 37.5% of identity |
|---|---|
| Blastx | Protein PAF1 homolog from Arabidopsis with 73.29% of identity |
| Eggnog | paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)(ENOG410YZXE) |
| Kegg | Link to kegg annotations (AT1G79730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436460.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |