Ll_transcript_467698

• Id Trinity: TRINITY_DN49240_c2_g5_i5
• Name Transcript: Ll_transcript_467698
• Sequence: ATTGATTACACTTATGCTTTCTACTTTTTGATTTGGAGTCCAAAAAAGACATTCCAATGTTATTATGATTATATTCTCAAATATAACATATGAATATTGG TTACATGCTTGATTTTCATGATGAAAAAATAGAAAATTAGTCCACATACTTCAGGATGTTCTTGGACAGGATTGTCTCGAGCATGTGGGAAACAAAAATA TTCTCAAACATAAAAAAACACAGCTTATTATCTTGTCTCTCTGCACTTACTCTCCGATCTCTTTCCCCTTCTTCTTCTACTTAGGTTTCACATTCTGCTT CAACTTTTGAATTAGGGTCTCCCAAATCCCAATTTTCCACACCAAGTTTCTGTTTCGTTGACCCTTTTCTGTAAAGTTTGCAATTTTGGTGAACGCACAA GTTTATCAATTCGGATTTTTCAATCTCCGATTACTAGGTTTTGAACTTTAACGCTACATTAGAGCTATAGGGACTTGAAATTCGTTTTGTCCCCGCTTGA TTTTTTGGTTTATTCCTCAAAGGGTTTCGGATTTTACTATTTATATAGTCAATGATTCACAATCTAATAGGTTCCCCCTTTTGATTATCTAGGGTTTAAT TATGTTCAGCATGATTTTGAAGATTTGAAATTAACCCTAGAAGTTTGTATTTTTTGTAGTTGGTTGGTTTAATTATTTGAGTTTTATTTATTGGATCTTG AGTTGTGAAATTGAGCATGGCCTCTTATAGGCCTCTTCCTCCTTCACAATCATCATTTGTTGCACAAAATCAAAACCCTAATGCACCAGCACAAACCCAA CAACATGGGAATTGGAAATATGGTGGAGGAGTAGTAGATGGGAGTGTGAATTCTTCAGCTCCCTCTACTTCATTCCCTCAACAAGGTGGTTATAACCAAA TGCCCCCAAATTCTAATTTTCAGCATCCTTATCAGCAATATCCATATCCACCGCCGCCGGCACCTCCCGAAACTTCATACCCTGCACCACCACCACCTCC TAATGCTCCTCCCATGTATTATCCTCCTAATCATTATTCTCAGTATGATAACAAGCAACCATTGCAGCCACCTCCTCCACCACCACCACCACCACCTTCT TCGCCGCCACCTAGTTCTTCTATCCCTCCACCACCACCTCCTAGTTCACCACCTCCCCCTCCCCCTCCAGCTCCTATGCAAAGTCGAAACAACGATGAGA GACGACCATATGATCGCAATAAAGGGCCTGTGAAGGAGACTTCGGCACCTGGTAGATGGGAACATGAGCAATCAAGTCATGGGCATAAACATCTGAAGCC TGCTGCTGTTCCTCCGATGCCAATAAAGAAACCAAACGCGCCTCCAGGGAGAGCTGAAACAGAAGATGAAAGGAGGTTAAGGAAAAAGAGAGAATTTGAG AAGCAAAGGCAAGAAGAAAAGCATAGGCATCAGGTAAAGGAGTCACAGAATAGTGTACTGCAAAAGAGTCAGATGTTATCATCTGGGAAGGGGCATGGTT CGGTCATAGGTTCGCGAATGGGAGAGAAGAGAAATACTCCCTTATTGAGTGGTGAGAGGATTGAAAATAGGTTGAAGAAGCCCACAACGTTTCTGTGTAA GATGAAATTCCGAAATGAACTTCCAGATCCAAGTGCACAACCCAAGCTAATGGCGTTCAAGAAAGAGAAAGACCAATATGCCAGATATACAATCACATCT CTAGAGAAAATGTACAAACCCAAACTTTTTATGGAGCCAGATCTTGGGATACCTCTTGACCTGCTCGATCTCAGTGTTTACAATCCTCCTAGTGTCAGAC CACCTCTTGACCCAGAAGATGAAGAATTGTTACGAGATGATGAAGTCATTACTCCTATTAAAAAAGATGGCATAAAAAGAAAAGAAAGGCCCACTGATAA AGGTGTTGCTTGGCTTGTCAAAACACAATATATATCTCCTCTGAGCATGGAATCGACAAAACAGTCTTTAACTGAAAAACAAGCAAAGGAACTAAGAGAG ATGAAGGGAGGCCGCAGCGTTTTAGGAAATCTTAACAGCAGGGAAAGACAAATAAAGGAAATACAAGCATCATTTCAAGCAGCTAAGTCACACCCTGTTC ATGCAACTAAGAAAGATTTGTATCCTGTTGAGGTTCTGCCTCTGCTACCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCAGCATTCGATAATGC TCCTTCAGTTGATTCAGAAATGTACAGTAAGTTGGACAAATCTGTTCGTGATGCCCATGAATCAAGGGCAATTATGAAAAGCTATGTTGCATCTAGCTCA GACCCTGCAAATCCTGAGAAATTTTTGGCATATATGGCCCCAGCACCTGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGACATCTCGTATTCTT GGATTCGCGAGTATCACTGGGATGTACGAGGTGATGATGCAGATGACCCAACAACATACTTAGTTTCGTTTGATGAGTCAGAGGCGCGCTATTTGCCCCT TCCAACAAAGCTTGTTTTAAGAAAAAAGAGAGCTAAAGAGGGAAGATCTGGTGAGGAGGTCGAACAATTTCCAATACCTTCAAGAGTTACCGTAAGGAGG AGGCCAAATGTTGCTGCCATCGAACTGAAGGATTCCGGGGCTTATACAAATACAAAGGGCAGTTCTTCAAGGAGAAGGGGTTTAGAAATTGATGATGATA TGGATGAGCCACATAGAGTTGCAGAATACCAGGATAATTACCAGTCTAGTGGAGCAGAAGATGACATGTCTGATTGATTCTTTGATGCAGATAGTATTAT TGCCTTCAAGCAAATTTTCCTATGAAGTTATGGTTGGATTGTTGGTTTCAGGTAGCTCAATTCCTAGGTGTTCCACTGAAGTAAAACAAATGATAAACAC CATATTAACTCTTCCTCATAATTCTATGTAGACAGTTTTTAAATCAATATAGGTTTTCCCTTTCAATACCACTAAAATAGAAAGAAAAAAAGAAGTGAAA TAAGGAAATGTAAAAAGCATGTCAGATTAAATGGTATCCTGAATATGGTTTTAGGGAATGTTTGTACACCAATGAGATTGCTGTTCTAATGTTTCATTCA TATATGGAAATGTAGTTATCTACTCTAAATGTACACTACGAAATACATTTCCATAATTAAAAAAGGAAAATATAATAATAATAAAAGTGTGAAAGATTCA CTTCGTCCAAGTTTAGCACTTGAAGTACTAAACCTTTGTATGCCAATTTTAAAAACTTAAAAAG
• Tissue: pods
• Gene name: LI_gene_167634;
• Additional information: details;

Expression of Ll_transcript_467698

FPKM

• PAB: 12.4
• PNAB: 9.3
• PS1: 12.2
• PS2: 7.1
• PS3: 11.1
• PW1: 9.8
• PW2: 9.4
• PW3: 7.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467698

• Blastp: Protein PAF1 homolog from Arabidopsis with 63.24% of identity
• Blastx: Protein PAF1 homolog from Arabidopsis with 70.49% of identity
• Eggnog: paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)(ENOG410YZXE)
• Kegg: Link to kegg annotations (AT1G79730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436460.1)
• Pfam: Paf1 (PF03985.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;