| Id Trinity | TRINITY_DN49242_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_468169 |
| Sequence | CTAAAATCCTGTATCATTAAACCAACGTGATAAATTTACAAATAAATATAAACTTAACTTTCTTTCCTCTTGGCTCTCACACATTCTGTATTTGCACAGG AGAGAGAAACTAAATAGAGGAAATCAAGAACAATACAAAAGAAGAGAGAGAAACAACACATATAAAAGAATCAGTGAGAGGAAATTAAAACATTTCAAAC CTGAACACGATTACCAAGTTAGGTAAAAGATGAAGAAGAAGTGTGAGTTATGCAATTCTCCAGCCACAATTTTCTGTGACTCAGACCAAGCTACCTTATG TTGGAACTGCGATTCAAAAGTTCACACTGCCAATTTCTTAGTCGCTAGACACACGAGAACTCTCCTCTGCCACACGTGCCACTCTCTCACGCCGTGGAAA GCCTCCGGTGCAACCATCGGAAACGCCGTTTCGCTTTGTGTGGGTTGCGCCGGTGGAACTAGGGTTCATGGTGATGAAGGGGAAGAGAGTGAAGGAGATA ATGGTGATGAGTTAGAGAGGTTGGATGAGGATGGAGAGAACCAGGTTGTTCCTTTGTCTTCTACGGCCACGGCGCCGCCGGATTGTAGGTTATTTGGCAG CGAAGGGTCTGTCACACGGTGCAGCCACGGCGATGAGGATGTTTCTGATTCGGCCATGGTGGTTTCGGTGAAACGATGTCGTGTTGATCATGATATCCAG GTTTGTGTAATTGTAGTGTTCGTTTATTTCAAGTTTTAAGCTTTGAAAAGTTTCACAAATTTTCTTTTGTCACAAGTCTGAACTAAAATGTTTCCAATTT TTGCACAAAATAATTGCACTGAACAAATATCCAAGTGTCGCCGTTTTAATTAAGTTAAGTTGTGGCTCGAGTATTAATTTTTGGACTACCTCCCATGTTT CCATATCTTTCATCTCTATCACTCATATAAATTGAATTTTGAGTCGGTTTTTAACTTTTAAGAAGTGTTATTAGAACGTATTAGATGGTCCGACAGGTAT GGTCGCTACCGAACTTAAAAATAATTTTGGTTTACTAACTTAAATAAGTGAGAGTTGAATCACTTTAAACGAGTGAAATAGCGGTCTGACCGTGTTAAAT CCGATTAAACTAGAATAATTCGGGAACTAAACCAAACGGTTCACTTGAAAATTAAAAAAATAGAACACTGTTCTAATAAAAATTATTAATTATATATTGA ATTATCCGATTAGATATCACGATTTAACCCCTAGAAAGTAATAAGAAATCTGTTCCTATTCTAAGTCTTATTTTTCACTTCTTCCAATTAGGAGTTGGAC ACAAAGTTTTAATTTTTATTTTATTTTCTTGATTTAGTGCTGAAGTGCTGAGTTTTGTTTAATAAATACAGGAGGTTTCGAAACGGAGATACGAGTCCGG TGGAAACCGGAGAGAGCAGGTTGATTTTTCAGAGTACGGCGGTAAACCGCCGTTAAAGGAGTCGTCGGCGACAGGTGTGGATTTATTGAATGGTTCACGC GGTTGTTGTGATAGTAGAAAATGTGAAGACCTTTTATCTGAGAAACAGGGAGAATCATCGCACGTCTGAATCGTACTATAAGATATTATTAATTTTATTA ATTATAGAGCTCTTTGATTAACTACCTGTCTACCTCTAACAGCAATCGATCCTAGTTATTGATGGTGACAATCAAATGTACAGAGTTAGTGTTTAATTTT TTATTTTATTTTCGAAATCTCTTGTTTTGATATTTTGAGGATGAGATTTGTCATGTGGAATGGTATAATTTTTTTCTTCTTTCCCATTATATATTAATTA TTTTGTTTAAAAATAAGGAAAACAACATGTCACTTATTAGAGAAAAAAAATATATATCCATAGTTTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_167659; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468169
| Blastp | B-box domain protein 30 from Arabidopsis with 54% of identity |
|---|---|
| Blastx | B-box domain protein 31 from Arabidopsis with 52.94% of identity |
| Eggnog | BBOX(ENOG411168W) |
| Kegg | Link to kegg annotations (AT4G15248) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442424.1) |
| Pfam | B-box zinc finger (PF00643.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |