Id Trinity | TRINITY_DN49245_c2_g1_i32 |
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Name Transcript | Ll_transcript_467543 |
Sequence | CTCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAAAGCCATCTTCTCAGAAACTCTTCTCCTTCAAATTCACCGACCAAATTCCTTTTCAC TATTGAAACAAAAATAAACTTCAAACTCATGAATCACATGCTTTAATAAAACCTCACAAACCCATCTCAATTTTTTTATTTAAACAATTTCTTATTAGAT CTCACTCATTTGGGTCATTTCTATTTCCAATTGGGTCTATCATTTCAGAAACCAATTGCACAAAAATGGTTTCTTTATCTACCTTTCCCTTTTCTCCACC CATCACACAAAACGCTGCGTTTCGCTCTGTTGCTTTTGTAAAGAAGCTTAATTCATTCAACAAGTTAAGTATTAAGGATCTTCATAGAAAGTTTGTTTGT GCTTGTATCGCTCCTCCTCCTCCTCAAAATTTCAAGAGTGAAGAAGACTCTTCCGCTATTAAATTCAACGGTTCATCCAAATCAGAACAATTAAGCACAG TGAGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGAAGTGTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGAT CAGACATGGTGAAGCTGTTGGAATAATCGGTCCCTCTGGGACTGGAAAATCTACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCAGACAAGGGAGAA GTATATATTCGAGGAAGAAAAAGAACTGGTTTAATAAGTGACGACGAGATATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATT CTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAAAATTCAAGCATGTCTGAGGACCAGATAGCAGATCTTGTCACAGAAAGCTTGGCTGCCGT TGGATTGAAGGGAGTTGAGGATCGGCTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGGTCTATTATTCATGATACTACAAAG GCTTCAATAGAGCCAGAGGTGCTTTTGTATGATGAACCAACTGCTGGACTTGATCCCATCGCATCTACTGTTGTTGAGGATCTTATTCGTTCTGTGCACA TAAAAGGACGCGACGCACTTGGTAAACCTGGGAATATAACATCTTATGTGGTTGTCACTCACCAACACAGTACCATTAAAAGAGCCATTGATAGGTTGTT GTTTCTGCACAAGGGAAAGCTTGTTTGGGAAGGAATGACCAATGAATTTATGACTTCAACAAATCCAATTGTTCAGCAAGTAAGTTTGTCTTCCTTTATC CGGGGTTAAATAACAGCACATCGAGTTGTGTTCTAAATTCTTTTATTGTGGAATCTAAGTTTCTTTATTTCGGATGATATGTAAATGTAACATCTGTAGA CAAACTAATATTAAAGAGAAGTTTTTTTATCTTCATTCAAAGTTCAGATCAATTACTGGTAATATAATATTACAAGCATCACAGTTTATAATTATTAAGA TCTTATTTTTGTCACATAAGATTTCTGTGACCAGTTCCTTTGTCTTCCTTTATTATTATATTAATTTTTAATTTTTATGAAGGGTAGTAATTTTCATTTC AAACCCCACTAGGTAGGAGTCTCGTGCATTGGGCCACCCTTTTTAAATGCTTTCTTCCCTTGTTGTCTGAAGTTTTATTTTTCAGGAGCATCCTCTTTAA AAGTAAGATTATCACTGATGCATGAGACTTATTCTATACGATCTTACGTTTCAACATTAATAATAAATTGTGGGCACTATCTGAAATGAAAATGAAGTAA TAGTTTCTGATCATACAAACACGGTATAAAAATATGGACTCGGACTAAATGGACTTCTTGAGGACATGTTTGAGTCAATCATTTAACTCCTACAATGTAA ACTGGAATGGCATGATGGTAGTTTCTGATTTCTTCCGAGTTTATGGGAAGTAGATCACTGAGTCTGGTTCTAGATTGCCATCCCTTGCTGCCATGGAATT GACATGTAGAAAACCTATGAATATTAGGAAATGAAACAGCTTGGTACTTCACTGGGCTGAAGTAGATTCAAAGGTTTGCCTTCTATTAAGGAGAAATGGA AGAGGAAACTTATTTTATTGGGACGTGTGATATAGGCGATGATGGATCCTAGTTACAAGAACTTGGATGTTGCCTTCTCACAATACTTTTTTATAAAAAA GTACCTTCCCATGAATATCTATTTCACACATTATATATGGCCGCTTTAGAAGGTGAGCTTAGCACAACAGTAAGATTGTTAGTTAGTGATCATGAGGTCA TAGGTTCATATCCGGAAGCATCCTCTCTGTTTGCGGGAGTAAGGCTGTATACACCCATACCCCACTAAGTGATAGTGTCATTCACTGTGCCGCCCTTTTT GTTGGTGTTGTTAAATTCGACCACTATGCTCTGCCAGATCATTGGACAATTGAACTATAATTAAACTTCTTTGAAGTCTTTTGCTTTTCCTTACATGTTA TTTCTATACCTTATAATACAATCAACCTTAAATTATAATGTTAATGTGTTTTTTGTTTTGTTATGCAGTTTGCATCTGGGAGCCTGGATGGTCCTATCAA ATATTAGATTCAATACTATGATCATACATTATCTAAACTCGATTAAGGCTTCTCTTGGCTGCCATGAAGTGTGCGGATAGGAATGCTAATGAATGTAGCG AAAAATAAGACAACTTTTGGTTGCAAGTTGCAACAATGATCGATTGGTTTCTCCGGTTTTTGGTATTAGCTTCTAAATTAACTTCGATTTTTAAGATTAG CCATCCACACTGGTTTGGAATTGTGTGAATTGGCTAATTGAAGCACACCATTAGTACTTGGCAGAAGCTGGTAGAAGATTGGTAGAACTGGATGTTTAAT ATCAGATAGAGTACTTGATGTGCTAAAATTTTATTGTATACAATTCATTATTTATAGTCAACATATATGTATTATTTTTGGGTTATTCCATCAATTTTCT CTTTATAAGCAACTATGTATAATTTCATTTGCACTGGTCCTGTATGTGTGTGTACTTCGCTAATATTATCACGTTGTTCTATACTCCCTTAGATTAACTA TTCACATTCCCTG BLAST |
Tissue | pods |
Gene name | LI_gene_167696; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467543
Blastp | Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic from Arabidopsis with 75.88% of identity |
---|---|
Blastx | Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic from Arabidopsis with 75.4% of identity |
Eggnog | lipid transport(COG1127) |
Kegg | Link to kegg annotations (AT1G65410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429411.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |