| Id Trinity | TRINITY_DN49245_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_467510 |
| Sequence | CTCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAAAGCCATCTTCTCAGAAACTCTTCTCCTTCAAATTCACCGACCAAATTCCTTTTCAC TATTGAAACAAAAATAAACTTCAAACTCATGAATCACATGCTTTAATAAAACCTCACAAACCCATCTCAATTTTTTTATTTAAACAATTTCTTATTAGAT CTCACTCATTTGGGTCATTTCTATTTCCAATTGGGTCTATCATTTCAGAAACCAATTGCACAAAAATGGTTTCTTTATCTACCTTTCCCTTTTCTCCACC CATCACACAAAACGCTGCGTTTCGCTCTGTTGCTTTTGTAAAGAAGCTTAATTCATTCAACAAGTTAAGTATTAAGGATCTTCATAGAAAGTTTGTTTGT GCTTGTATCGCTCCTCCTCCTCCTCAAAATTTCAAGAGTGAAGAAGACTCTTCCGCTATTAAATTCAACGGTTCATCCAAATCAGAACAATTAAGCACAG TGAGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGAAGTGTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGGT GACTGAGGCCTCTTATTTTGTTATTCTGTGGAGTGATATGTAACATGAAATTATGAGTGTTTGTCAAAGTAAAATTGGATTTTTTACTGGTCGGGAGATT GCTAAATATTTCACCTTATTTTCCCCCGGATTTGGACATTATGTTTAGATCAGACATGGTGAAGCTGTTGGAATAATCGGTCCCTCTGGGACTGGAAAAT CTACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCAGACAAGGGAGAAGTATATATTCGAGGAAGAAAAAGAACTGGTTTAATAAGTGACGACGAGAT ATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAAAATTCAAGC ATGTCTGAGGACCAGATAGCAGATCTTGTCACAGAAAGCTTGGCTGCCGTTGGATTGAAGGGAGTTGAGGATCGGCTGCCTTCTGAGTTATCAGGTGGGA TGAAAAAGCGAGTTGCTTTAGCTCGGTCTATTATTCATGATACTACAAAGGCTTCAATAGAGCCAGAGGTGCTTTTGTATGATGAACCAACTGCTGGACT TGATCCCATCGCATCTACTGTTGTTGAGGATCTTATTCGTTCTGTGCACATAAAAGGACGCGACGCACTTGGTAAACCTGGGAATATAACATCTTATGTG GTTGTCACTCACCAACACAGTACCATTAAAAGAGCCATTGATAGGTTGTTGTTTCTGCACAAGGGAAAGCTTGTTTGGGAAGGAATGACCAATGAATTTA TGACTTCAACAAATCCAATTGTTCAGCAAGTAAGTTTGTCTTCCTTTATCCGGGGTTAAATAACAGCACATCGAGTTGTGTTCTAAATTCTTTTATTGTG GAATCTAAGTTTCTTTATTTCGGATGATATGTAAATGTAACATCTGTAGACAAACTAATATTAAAGAGAAGTTTTTTTATCTTCATTCAAAGTTCAGATC AATTACTGGTAATATAATATTACAAGCATCACAGTTTATAATTATTAAGATCTTATTTTTGTCACATAAGATTTCTGTGACCAGTTCCTTTGTCTTCCTT TATTATTATATTAATTTTTAATTTTTATGAAGGGTAGTAATTTTCATTTCAAACCCCACTAGGTAGGAGTCTCGTGCATTGGGCCACCCTTTTTAAATGC TTTCTTCCCTTGTTGTCTGAAGTTTTATTTTTCAGGAGCATCCTCTTTAAAAGTAAGATTATCACTGATGCATGAGACTTATTCTATACGATCTTACGTT TCAACATTAATAATAAATTGTGGGCACTATCTGAAATGAAAATGAAGTAATAGTTTCTGATCATACAAACACGGTATAAAAATATGGACTCGGACTAAAT GGACTTCTTGAGGACATGTTTGAGTCAATCATTTAACTCCTACAATGTAAACTGGAATGGCATGATGGTAGTTTCTGATTTCTTCCGAGTTTATGGGAAG TAGATCACTGAGTCTGGTTCTAGATTGCCATCCCTTGCTGCCATGGAATTGACATGTAGAAAACCTATGAATATTAGGAAATGAAACAGCTTGGTACTTC ACTGGGCTGAAGTAGATTCAAAGGTTTGCCTTCTATTAAGGAGAAATGGAAGAGGAAACTTATTTTATTGGGACGTGTGATATAGGCGATGATGGATCCT AGTTACAAGAACTTGGATGTTGCCTTCTCACAATACTTTTTTATAAAAAAGTACCTTCCCATGAATATCTATTTCACACATTATATATGGCCGCTTTAGA AGGTGAGCTTAGCACAACAGTAAGATTGTTAGTTAGTGATCATGAGGTCATAGGTTCATATCCGGAAGCATCCTCTCTGTTTGCGGGAGTAAGGCTGTAT ACACCCATACCCCACTAAGTGATAGTGTCATTCACTGTGCCGCCCTTTTTGTTGGTGTTGTTAAATTCGACCACTATGCTCTGCCAGATCATTGGACAAT TGAACTATAATTAAACTTCTTTGAAGTCTTTTGCTTTTCCTTACATGTTATTTCTATACCTTATAATACAATCAACCTTAAATTATAATGTTAATGTGTT TCCTGGTGTTGCTGTGCAGTTTGCTTCTGGGAGTCTGGATGGCCCTATCAAATATTAGATCAGCACCACGATCGTAAACTAACTAAACCGCCGGATTATG GCTACTCCTGGCAGCCATGAGGCGTGCGGATACGAATGAGAATGGATGTAGCTTACATTAAGACAACTTCTTGAAGAATCAAGGGGTTTGTCAGTGTTTT GGTATTTAATTTTCTTTGTAAGAATTGGCCATCCACGTTGGTTTGGAAGCTGCAAACACAGCTTATTTTTACTGGTTATTGTGTGAGTTGATTCATTGGC TTTACATGTATATTAGACGCACCTCATTGTTACTCCACATAAGCTGGTAGAAGATTTGTAGAACTTAATGTATTAATATGAGATGGAGTATTTAATGTGC TAATTTTTTATTGTAAACATTTCATTATTTATAATCAATAAATCTGGGACAACTTTATCTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167696; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467510
| Blastp | Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic from Arabidopsis with 79.19% of identity |
|---|---|
| Blastx | Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic from Arabidopsis with 65.37% of identity |
| Eggnog | lipid transport(COG1127) |
| Kegg | Link to kegg annotations (AT1G65410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429411.1) |
| Pfam | ABC transporter (PF00005.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |