Ll_transcript_466273

• Id Trinity: TRINITY_DN49247_c1_g1_i1
• Name Transcript: Ll_transcript_466273
• Sequence: AACAATCGTTTCTCTCTCCGTGGACCGAAATAACCACTTCTCTTCTCTTCTCTTCTCTTTATAACTAACCCCAAACTCTCTTCTCTTCTTTGACACTCAC TCAATGGAACACTGCATATTCTCCAACCTCAAAACCCAACCTTTATGGCTCCTCTTCCTCTTCTCCCTCGGTTCCATCACCCTCCTTCGCTTCTCCTTCA TTTTCCTCAACTGGGTCTACGTCAATTTCCTCAGACCCTCCAAAAACCTCAAAAAGTACGGATCTTGGGCCCTCATCACCGGCCCCACCGACGGCATCGG CAAAGGTTTCGCCTTTCACCTCGCCCGGAAGGGACTCAACCTCGTCCTTGTCGGCCGCAGCCCGGAGAAGCTGAAGGATGTCTCTGATTCAATCGCCGCC AAGTTCGGGAAAATTAAGGTTGTCACGGTTGTTGTGGATTTCTCAGGTGATCTAGATTCTGGGATGGAGAAGATTAGAGAAGCGATTGAAGGGCTTGATG TTGGAGTATTAGTGAACAATGTTGGGGTTTCTTACCCTTATGCTAGATTCTTTCATGAGGTTGATGATGAGATTTTGAGGAATTTGATTAAGGTGAATAT TGAAGGGACTACTAAGGTTACTCAAGTTGTGTTACCTGGTATGATTAAGAGGAAGAAAGGTGCTATTGTTAATCTTGGTTCTGGTGCTGCTATTGTTATT CCTTCTGATCCGCTTTATGCTGTTTATGCTGCATCTAAAGCGTACATCGATCAATTTTCTAGATGTCTGTATGTGGAATACAAGAAATACGGGATTGACG TGCAGTGTCAGGTATTGAATTCTGTTCTTGCTTTTACCTTCAAGGCTTCAACCATGGGCTACCCCATCCATTGATAACGTCGGGCTACCATTGGCCCACA CTCTTTCCGTTACCTGTTAGCATTCTGCCATATGGGCATGATATGCTACATGCCATCCCATCTCTGAACTCATACATTCCGTCCCATCTACCTTATCCTT CTTGCTTAGTTGCTCTGTTGGTTCTTTGGCTCCATCCACGATTTGATGCTCTTATACTGGTTGTAGAAATTGGTCATGTCCACCACCAGATCCTTGATAA ACATGTGTGACAGTGGTGGAAAACAACGAGGAAGGGATCTTGGTGAAGCACACGAGTTTGGATAGAATCAAGTTGGTATTTTGGTTCACCCCATTAAGCC TAAGTGTTGACAATTTCTGGCTTTTGGGGGTCAGATTTTAGGGATTCAATATTGTCTTTGAAGCTCTCTCACCCTGTGGATCTCTTTGATTATGGGTTTT GAGTAATTGAGTGGCAATGGTGGTTCTTCGGTGATAAGTCTGTGTGCAATAGTTTGCTGATTACTTATGTGAATTATTAGGCAAAGTACAATTTTACATT CGCGTATGCCTCTGCTATTTCATTTTCCCTTAGTCCATCCAAACTCTTTTTTCCGAACAGTTGGAAAATTGTCCGCCTAAATATTAGTTTATGAAAGAGA GTGGACTATGGGTGAGTTTTGGTGAACAATTTAATTGATCATTTCTTCAGTATGTTTTTTCCTGAAAATAACTAAAAAGTGCATCAAAAGCTATTTTCCT AGGTTGTTTTTGCAAGCCTCGATAGCTTCTCTTAAACTCTTCCGAATTGTCATGGATTGGTTTGCTTTTATGTGTGCAAAGTCTGCTATGATTTTTGCCA TCTCTAATAAAGATTTTGTGGATGCAGGTTCCGTTATACGTGGCAACAAAGATGGCATCAATAAAGAGATCATCATTCTTTGTCCCATCGACAGATGGAT ATGCCAAAGCAGGTGTGAGATGGATCGGCTATGAACCTCGTTGCACACCATACTGGCCCCATACCCTTCTCTGGGCCTTGGCATACTCATTGCCAGAGTC TGTTGTTGATGCTTGGCGCCTCCGGTTCTGCCTCGGTATTCGGAAGAGGGGACAGCTCAAGGATTCAAGGAAGAAGGAATGAAAACATCCATGTTTTTGA TATGTAGGCATAGATACAGATGAGTAAATCATCATTTAAGTCCTCCAAAGATAACAGCTTTATCAGTTAGGTCCTTGGAATAGTTTGCCACCAAATAAGT TCATGAAAGTTTAAATGCTACAAAGCTGTCAAAAAATTTAATTGTCACTAATTAAGTCCTTAGGAAGGACCTATATGGTGACATTTTAAAACTATCATGG ACTTGTTCGGTGACACAAATTTTTGAAGGACCAAACTGGTAATGTCATCTTCGGAATACGGAATCGAGGGTTTACTCATAGTAGATTAAGGTTCTAAGTG TCTGTTATGTTTCTGATTTTCATGTTAGTATTGGTTAGCCTTTATGAGATGTAACAATGGATTGGCCTAATCTTTTTCATTCCTTATATTTGGTTGGTTC TGTTCAGTGTTGTATGATGATTAAACAGTTGCTGATTTTGTTGAGTGTTGAAATAATCTGATTTTGCACCTGCACTTGGATCAATCAGATTATTTGAATC AAATTGAATTGAATTTGACCTCTATATTTTGAATTCCTCAAAAA
• Tissue: pods
• Gene name: LI_gene_167711;
• Additional information: details;

Expression of Ll_transcript_466273

FPKM

• PAB: 0.3
• PNAB: 1.2
• PS1: 0.3
• PS2: 0.5
• PS3: 0.6
• PW1: 0.3
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_466273

• Blastp: Very-long-chain 3-oxoacyl-CoA reductase 1 from Arabidopsis with 66.67% of identity
• Blastx: Very-long-chain 3-oxoacyl-CoA reductase 1 from Arabidopsis with 66.67% of identity
• Eggnog: Dehydrogenase(COG0300)
• Kegg: Link to kegg annotations (AT1G67730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414746.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;