Id Trinity | TRINITY_DN49247_c1_g1_i5 |
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Name Transcript | Ll_transcript_466288 |
Sequence | AACAATCGTTTCTCTCTCCGTGGACCGAAATAACCACTTCTCTTCTCTTCTCTTCTCTTTATAACTAACCCCAAACTCTCTTCTCTTCTTTGACACTCAC TCAATGGAACACTGCATATTCTCCAACCTCAAAACCCAACCTTTATGGCTCCTCTTCCTCTTCTCCCTCGGTTCCATCACCCTCCTTCGCTTCTCCTTCA TTTTCCTCAACTGGGTCTACGTCAATTTCCTCAGACCCTCCAAAAACCTCAAAAAGTACGGATCTTGGGCCCTCATCACCGGCCCCACCGACGGCATCGG CAAAGGTTTCGCCTTTCACCTCGCCCGGAAGGGACTCAACCTCGTCCTTGTCGGCCGCAGCCCGGAGAAGCTGAAGGATGTCTCTGATTCAATCGCCGCC AAGTTCGGGAAAATTAAGGTTGTCACGGTTGTTGTGGATTTCTCAGGTGATCTAGATTCTGGGATGGAGAAGATTAGAGAAGCGATTGAAGGGCTTGATG TTGGAGTATTAGTGAACAATGTTGGGGTTTCTTACCCTTATGCTAGATTCTTTCATGAGGTTGATGATGAGATTTTGAGGAATTTGATTAAGGTGAATAT TGAAGGGACTACTAAGGTTACTCAAGTTGTGTTACCTGGTATGATTAAGAGGAAGAAAGGTGCTATTGTTAATCTTGGTTCTGGTGCTGCTATTGTTATT CCTTCTGATCCGCTTTATGCTGTTTATGCTGCATCTAAAGCGTACATCGATCAATTTTCTAGATGTCTGTATGTGGAATACAAGAAATACGGGATTGACG TGCAGTGTCAGGTTCCGTTATACGTGGCAACAAAGATGGCATCAATAAAGAGATCATCATTCTTTGTCCCATCGACAGATGGATATGCCAAAGCAGGTGT GAGATGGATCGGCTATGAACCTCGTTGCACACCATACTGGCCCCATACCCTTCTCTGGGCCTTGGCATACTCATTGCCAGAGTCTGTTGTTGATGCTTGG CGCCTCCGGTTCTGCCTCGGTATTCGGAAGAGGGGACAGCTCAAGGATTCAAGGAAGAAGGAATGAAAACATCCATGTTTTTGATATGTAGGCATAGATA CAGATGAGTAAATCATCATTTAAGTCCTCCAAAGATAACAGCTTTATCAGTTAGGTCCTTGGAATAGTTTGCCACCAAATAAGTTCATGAAAGTTTAAAT GCTACAAAGCTGTCAAAAAATTTAATTGTCACTAATTAAGTCCTTAGGAAGGACCTATATGGTGACATTTTAAAACTATCATGGACTTGTTCGGTGACAC AAATTTTTGAAGGACCAAACTGGTAATGTCATCTTCGGAATACGGAATCGAGGGTTTACTCATAGTAGATTAAGGTTCTAAGTGTCTGTTATGTTTCTGA TTTTCATGTTAGTATTGGTTAGCCTTTATGAGATGTAACAATGGATTGGCCTAATCTTTTTCATTCCTTATATTTGGTTGGTTCTGTTCAGTGTTGTATG ATGATTAAACAGTTGCTGATTTTGTTGAGTGTTGAAATAATCTGATTTTGCACCTGCACTTGGATCAATCAGATTATTTGAATCAAATTGAATTGAATTT GACCTCTATATTTTGAATTCCTCAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_167711; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466288
Blastp | Very-long-chain 3-oxoacyl-CoA reductase 1 from Arabidopsis with 64.69% of identity |
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Blastx | Very-long-chain 3-oxoacyl-CoA reductase 1 from Arabidopsis with 64.69% of identity |
Eggnog | Dehydrogenase(COG0300) |
Kegg | Link to kegg annotations (AT1G67730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414746.1) |
Pfam | short chain dehydrogenase (PF00106.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |