| Id Trinity | TRINITY_DN49248_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_466803 |
| Sequence | AAAACAGTAGGACCTTCCTACATAACAGAAAAGGAAGTGACCCAGCATTGATCTTGTTCCCAATCCCCCTCTCTACTACACACATACCTGGATCTCAATC TCTCAGTCACACAGATCCAATCCGTTTCTGAATTAACTTCCTAATGGAAATCCCCTTTCTTCAACAATGACCAAATCCAAAGCCATAGCAGAAAACAACA ACAACGATGAAGAACACCACTCTTTCTACGACTCTCACGACCGTTTAATCTCCAACACCACCTCTGAAAAAGACTCTTCCACTTCCACCTCCATCTCCGA AGACGATAACGACTCATTTTCCAACTCTCCCACTCCAACTCATCATGACTTCACTTCCTCCAACTACCACATTTGGACTTCTCAACCCTCCTCCGTCTCT GAACGCCGCACCAACCTCCTCCGCAATTTCGGTCTCGCCGCCAACCCCCATTCCTCCGCCGCCGATCCTGACTTCTCCCGATCAATATCTTCTTGTTACC TGACCGGCACCGGTACTTCCCACGCCGCCGCGATTTTCCGATCGAAATCAAACGGTGCGGCGATTCGCTCCAATTCGTTTCCGATTCCTTCCGACGGAGC GAAGAGCGGGACTGGTTCAATTGTGAATAACAATAGGGAGGAGGGTTTGGAGAAGGTTGATGAAGAAGCGTGGACGATAATAAAGGATCTTGATAACGGG AAGGAGTTTGTGGTGAAGGAAAACGGCATGATTAACAAGGTTAAGGAAGTTGGGACTGGGAAGCATTTGACTATGGAGGAATTCGAAATGACCGTTGGGA TTTCCCCAATTGTTCAAGAACTAATGCGAAGGCAAAATGTCGAGGAGGCTAGTCGCAGTAGTGTAGATTCCAATCGGAATAATGATGATGCTGGTGGTGA CTGCAATGATAATGATGGTTTTAAGTTGAAAAGGAGAGGAAGTTGGTTTAAGAGTATAATAAAGAGGGCTGTTTCGGCTCCTCTCCGGGCGAGGCGGAGG TGGAGTAGTGAAAGGGATACTGGCTCCGAGAAAGGTGGTGGGAGGTTGAGTTCCGCTACCGATGATAGCCAAGCTGATGGTTCATTTAATGGGGCTGAGA GAGTGAGGGTAAGACAGTATGGGAAATCATGTAAAGAGCTCAGTGGACTTTATAATATTCAGGAGATACAGGCTCATAATGGACCCATTTGGACTATAAA GTTTAGCTTGGATGGCAAGTATCTTGCTAGTGCAGGTGAGGATTGTGTGATTAATGTATGGAAGATTGTCGAATCTCGGATCAAGAGGGAGTTGCTCATA GACAAACAAGAGGATGGGGGTAATATGAATACGTTGTTGGTTGTGAATGGATCACCGGAACCAGCTCTGCTGTCCCCTGGTTTGGACAGTCATTTGGAGC ATAAGAGCATTGGGAGGAGATCCTCTTTTAGCAGAAAACCATTGAGCTTGAATCAAATTGTAGTGCCAGAAACTGTGTTTGCACTTGAAGAAAACCCTGT TTGCTCCTTTAAAGGCCATCTCCATGACGTGCTTGACCTTTCTTGGTCCAAGTCTCAGCACTTGCTCTCGTCTTCAATGGACAAAACTGTCCGGCTGTGG CATTTGTCTAGCAAGTCATGTTTGAAGATTTTTTCACACAGTGACTATGTAACTTGCATCCAGTTCAATCCCGTTGATGATAGATACTTCATTAGCGGAT CTTTGGATGCTAAGGTTCGCATATGGAGCATTGCGGATCGTCAAGTTGTTGATTGGGCTGATCTGCCTGAGATGGTCACTGCTGCTTGTTATACACCTGA TGGTCAGGGTGCACTAGTTGGTTCATACAAGGGTCACTGCTATTTATATAATATTTCTGAAAATAAGTTGCAGCAGAAAAGTCAGATCAGTCTGCAGAAC AGGAAAAAGAAATCGAATCGCAAGAAAATTACTGGCTTCCAGTTTGCCCCAGGAAGCTCAACTGAAATTCTCATTACATCTGCTGATTCACGGATTCGGG TTGTTGATGGTGTTGATCTGGTTCATAAATTTAAAGGTAGGTAAATTAGTTATATGTCAAGTGAAATTTATCAATGACATATGACAAGTGAATACACCAT TATGTAAAGTTTCATCTGAATAAAATTTGTTGTGGTCTCTATTGTTGTACCTTAATGTGGAATTGGAATGGAAGTTACTTTTGTTTATTCTCTTTTGGAG AGGATGAGGCATTAAGACATGGGGACTTCATTTGAACAATACGAGAAATGTGGTCATTCCTAGTTTGATTCTTGTGTGGAATCGGAATAGGTCTCTAGTA TATTTATTTGCATTCTAGTCCCCATTTCAGGTTAAAATGATACAAGTTTTGTGCAGGTTTTGGGAATGCAAATAGCCAAATTTCGGCCTCCCTCACAGCA AATGGTAGATATGTTGTCTCAGCTAGTGAGGATTCTTACGTATACATCTGGACAAATGAATCTCATTGCAGACCTAAGAGAAGTAAAAGTGTCACCGTCA CAAGCTCATATGAACATTTTCATTGTAAATATGTATCAGTGGCCATTCCTTGGCCTGGTATAGATGACGCATGGGAGATACAAGGTACATTTTGTGGTGA TAAAATGGAGGTTGATGATAACCTGGATGAAGTCTCATCTGCCAATCTTCCTCCTACCCCTGTAGAGGAAAATTTTGGTGCCAAGGATTTCCAATCTGCA ATGGGTTGCAAGAATAGTCCACTTCAGGGAACTATTGCAAATGCATCAAGTAAATACTTTTTTGATAGAATTTCCACCACATGGTCAGAGGGAAAATTTC CTGATGCTGCAACGAACCGAAGCCCTCGTGTCAGAATGAGCCAAAACATGTCAGCATGGGGTATGGTAATTGTAACTGCCGGCCTTCGAGGGGAAATTAG AACTTTTCAAAATTTTGGATTGCCTCTTGGGATATAAGAGGTGATCTAAAATGCATGCCTAATGAGCTTGGGAGAATGAGTTAATGATATCTGCTCAGAG GATGGTAGACTTAACTTTCTCCATTAGTTGGTGAAAACTTGTACAGGGAGATGCTGGTTGAGAATATTAGAGTAGTTCCATTTCTTTCCTTGTTCTCTTG CTTATTGGATGCGGAAATAGGTTGTCATTCTGATCAAGCATTGGCTGTGAGAAAAGGGGGGAAATGAAAACAGAGTTGTGTAGAAAAAAGAAAACAAAAT ATAGTATACAAAGAATTTGGAAACTGATGGATTGATGTATTGGGTAAATGTAGATTAACGAGCATGGACAGAGGTTATGGATTTATAAATGATATTCTTT CTGTTGTTGATACCAGTCTTGTTTTGGTGTGGAATTAGATTTCTTGTCCATTGAATCAATTTCTCAATAAAATATCATGGCTACAAGTGAGATTGTGGCT AGGGAATTTCAGACTGGAAAATTGTCCATGGCTGGAAATCTGCCTTTGTCGAGCATATTAAGATTTGTTTACCAATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_167721; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466803
| Blastp | WD repeat-containing protein 44 from Bos with 32.24% of identity |
|---|---|
| Blastx | WD repeat-containing protein 44 from Bos with 31.83% of identity |
| Eggnog | WD repeatcontaining protein(ENOG410XQPJ) |
| Kegg | Link to kegg annotations (286825) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465152.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |