| Id Trinity | TRINITY_DN49255_c6_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_468090 |
| Sequence | GTCTGATACATGAAATCATTGCACAATACTTTATTCTTTTTTCTTATTCTTCATCTTTATAAATACTCTTCCTCACATGTTAGTAATTGTTTGTAGGTTG TGAAATTAAGTTGCAAAGATGTTTTCAGGGATCACAGGCATCTTGAATAGAGGGCATAAGATAAAAGGGAGAGTGGTATTGATGCGAAAAAATGTGTTGG ATATCAACAGTTTAACCAGTGTTGGTGGAATCATTGGTGAAGGTTTTGACATAATTGGTTCAACAGTTGATGGACTCACTTCATTCTTGGGCAGATCTGT GTCTATCCAATTGATTAGTGCTACCAAAGCTGATGCAAACGGGAAAGGGGTAGTTGGAAAGGCAACTTTTTTGGAAGGTATCATTGCTTCATTACCAACC TTGGGAGCAGGCCAATCTGCATTTAGTATTCACTTTGAATGGGATGAAGACATGGGAATTCCTGGTGCATTTCTTATCAACAACTTCATGCAAACTGAGT TCTTCTTAGTCAGTTTCACTCTTGAAGACATTCCAAACCATGGAACCATATACTTTGTTTGCAACTCTTGGGTTTATAATGCAAAACACTACAAATCCCA ACGCCTTTTCTTTGACAACAAGACATATCTTCCAAGTGAGACACCAGGTCCACTAGGCAAGTATAGAGAAGAAGAATTGCAGAATTTAAGAGGAGATGGG AAAGGAGAGCGTAAAGAATGGGAAAATATTTATGACTATGATGTCTACAATGACTTAGGTGATCCAGATAAAGGTGATAAGCATGCTCGTCCTATTCTAG GAGGGAATGAAACCTTTCCTTACCCTCGAAGGGGAAGAACTGGCAGAAAACCAACAAGGAAAGATCCAAATAGTGAGAGTAGAAGTAATGATGTTTATCT TCCAAGAGATGAAGCTTTTGGTCACTTGAAGTCTTCAGACTTTCTGACTTATGCTCTGAAATCTGTGTCACAAGATGTCCTCCCATTACTACAATCTGTG TTTGATTTGAATTTCACACCAACTGAGTTTGATAGCTTTGATGAAGTTCATGGACTCTATGAGGGTGGAATTAAGCTTCCTACAAGTGTGCTTAGTAAGA TTAGTCCATTACCAGTGCTTAAGGAAATATTTAGAACTGATGGTGAACAAACCCTTAAGTTTCCACCACCTAAAATAATCCAAGTGAATAAATCTGCATG GATGACTGATCAAGAATTTGCAAGAGAAATGCTTTGTGGTGTAAATCCACACTTGATTCGTTGTCTTCAGGAATTCCCTTCAAGAAGCAAGCTAGATAGC AAAGTCTATGGTGATCACACTAGTAAAATAACCAAGGAACACCTAGAGCCTAACTTAGAAGGGCTCAGTGTAGATGAGGCAATCCAAAACAAGAGACTCT TCATACTAGATCACCATGACCCAATCATGCCATATTTAAGCCGAATAAATGCAACTTCCACCAAAGCTTATGCTACTAGGACCATCCTTTTCTTGAAAGA AGATGGAACTTTGAAGCCAGTGGCCATAGAGTTAAGTTTGCCACATCCACAAGGAGGTCAATCTGGTGCTGTTAGTCAAGTTTATCTGCCTGCAGATGAA GGTGTTGAGAGTTCTATTTGGCTACTAGCTAAAGCTTATGTTATTGTGAATGACTCATGCTATCATCAACTCGTTAGCCATTGGTTAAATACTCATGCAG TTGTTGAGCCATTCATCATAGCAACAAACAGGCATCTAAGTTCTCTTCACCCAATTTATAAGCTTTTGTATCCTCATTATCGTGACACTATGAATATAAA TGCCCTTGCAAGACAATCCCTAGTCAATGAAGGTGGTATCATAGAACAAACATTCTTGTGGGGAAGATATTCTTTGGAAATGTCTGCTGTCATTTACAAG GATTGGGTTTTTACTGAGCAAGCATTGCCTGCGGATCTTATCAAAAGAGGAATGGCAATTGAGGATCCTGCATCCCCTTATGGCCTTCGCCTTGTGATAG AGGACTACCCTTATGCTGTTGATGGACTAGAAATATGGAATGCAATCAAAACATGGGTCCAAGACTATGTCTCCTTGTACTATACATCAGATGACATAAT TGAAAAAGATTCTGAGCTCCAAGCTTGGTGGAAAGAACTTGTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_167779; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468090
| Blastp | Seed linoleate 9S-lipoxygenase-3 from Soja with 84.8% of identity |
|---|---|
| Blastx | Seed linoleate 9S-lipoxygenase-3 from Soja with 84.8% of identity |
| Eggnog | Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)(ENOG410XT0Q) |
| Kegg | Link to kegg annotations (547869) |
| CantataDB | Link to cantataDB annotations (CNT0000973) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436509.1) |
| Pfam | PLAT/LH2 domain (PF01477.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |