Ll_transcript_467473

• Id Trinity: TRINITY_DN49263_c4_g2_i2
• Name Transcript: Ll_transcript_467473
• Sequence: CTCAAGCACCACCCCTTATCTCATGGCCCCACAATCTTTTTTCATTTCTACCAATATCATCGCACCATAAAGCCTCACCCTTTTCATCCCCATTTCCTCA CACACCATCGTTACTCCTCTGAATATAAATCCATCAAACGAATAAACGCTATGGACAAATAACACAAAATCTTCATCTTCTATTAACATCTTTCTTCAAT TCAATGGCTCTTATATCTCTCTCACTTCTTCCCTCTCTTCTTCCACACTCTTCTTCTTCTTCTTCTTCTTCATGTGCTGGTGTGCTTCATTTCCGTTCCT ACAACAACAACAATAACAACAACTTCGTTTCGATTAATTCTTCTTCTTCTTTTACTTCTTCAAGTTCTAATATCGCTCGGAGTCGAAGTCGCCGCCGATT TCAGACGCTAGTTGTAGCGGCTTCCGGCGATTACTATGCTACTCTTGGAGTCTCTAAATCTGCTACTGTTAAGGAGATTAAATCTGCTTATCGAAAGCTA GCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGA GGGCTTTGTATGATCAATACGGTGAGGCTGGAGTCAAGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGGTATTCAATGTGTCTTCTAATTTGTTTTT CATGTTTGAGTTTATGGAATAACACATAATTGAAAGGATGATAAAAACTTGATGCTAGGAGAATTACTGATAATATTACCAACTGCTCCAATACATATAT GTTGCCTTCTTTTTGGACACAAATTGAAATGCATGCCAATTTGAGTTGACTTGATCTATTCTTCTATTTCTGCTTCTATAAGGTTCATTTATATTGAACA AATTTTTTTGCAGACTAATCCATTTGATTTATTTGAGACTTTTTTTGGGCCAAATATGGGTGGATTTGCTGGCATGGATTCAACTGGATTTGGAACACAG CGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCGTTGGATTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTCGAGCTTTCCC ATTTAGAAATATGTGAAGTCTGTACGGGTACAGGAGCAAAGATAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTGGGAGGGGTCAGGTGATGAGGAC TGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTATGTCCAAACTGTGGAGGGAATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGCGGT GAAGGTCGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGTTCCTCCCGGGGTTAGCTCAGGCAGTATTCTAAGAGTTGCTAGGGAGGGTGATGCTGGAC CAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAACGTGGAAGAGATACCAGGAATTCAAAGAGATGACATAAATCTCCGCTCAACAATATCCAT CAGTTATCTAGATGCCATAATCGGGGCTATTGTGAAGGTTAAGACAGTTGAAGGCACTTCTGAACTACAAATACCTTCGGGCACCCAACCTGGAGATGTC CTTGTCCTTGCAAGGAAAGGTGTACCGAAATTAAACAGACCATCAATACGCGGTGACCACTTATTTACAGTTAAAGTTACTATACCGAAACGGATTAGCA CAAAGGAACGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGCACAACAAGTAGCCGTTCAGTATCTCGCCCTAAAACTAACTCTTCCAGAAGTAGTGAAGG CCCTTTAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTTCAGAAGAAGTTGAACAAAAAGAGGACCAAAATGATATATGGAAGGCATTAAAGGACTTA GCTGGGTCCGTAGCAAATGGAGCTGTAAAGTGGCTGAAAGATAATCTCTAGTCGCATTGATTTATTAGATGGTCCAGAGTCTTCAGGATGCAGCTTATCT AATTGTGGCTCAAGTTTTAATGATTCCAACAGCATCTTCAACTATGCAGGCATTTTTGTTGGGTGCTTTAACTGAAAATTGTTCTCCACACAGAAATGGG TCATGCATATTCTTTTATTTGTAAATTTTGGCACAAAGACCATGTATACAGAACCACTCGTTCACGGATCTTCAAATTGTACTACATGAGCATGTTGCGG TAGAAAAAGGCGGTGTATGCCTGACTTGAAGTTTAAGGTCTATTTGAGTCCTATAGTTAGTTTTCATCAAGTGAATCCTAATGTTGAATTAGGGGGAATT TTAGCTTTATAAAAGCTGTTTCCAATTAGGACCTTGTAAGCGTATTTCTTTCATTTTTTGTTGGTAAAACCATGACATTTTGTAGTATCCTTTTGGTGTA AGACTAATTTTTGTTTGCATGCTGATCCCAGGTATAAGATGTTTCTAGTGTATTGTAAAAGGATCAAGGTCCTCCCTCACCTGTTGGTAGAAAGCAATAT CAAATATGATCAAACTTATTTATGTTGTTATGTTTATTTAAGTTAAACATATAAATAAAGGGTGAAGCTTTGCTGAATCAAAAAA
• Tissue: pods
• Gene name: LI_gene_167843;
• Additional information: details;

Expression of Ll_transcript_467473

FPKM

• PAB: 0.4
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.2
• PS3: 0
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467473

• Blastp: Chaperone protein DnaJ from Thermosynechococcus with 54.14% of identity
• Blastx: Chaperone protein DnaJ from Cyanothece with 54.98% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (tll0790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448083.1)
• Pfam: DnaJ C terminal domain (PF01556.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;