Ll_transcript_467475

• Id Trinity: TRINITY_DN49263_c4_g2_i3
• Name Transcript: Ll_transcript_467475
• Sequence: TTTTCATTTCCTAGATATGAAGTTAGAAAATGTAGAGATTGATGTAAGAAGAGTTTGACTAGGTTTTAGTTTTGTTAATGATATTTGTTAGAAGAGTTTA GTTATGATATACTTCGTCACATTTAACCAATCATTTGTCATGTAACTTTTGAAGTTCTTGTAATGACATGTCACTACACAATTGATTCCGTTGAGGAGAT TAAATATGCTTAATTTTACATGTTAATTTTCATTTCCAAGTTATTAAGTAAGAAATTGATAAGAAGGATTTTAACTAGGTTTTACTTTTGTTAATGATAT TTGTTAAAAGTTTAATTATGATGTACGCGGTCTAACTATTCAGTATTCATCATTTGTCATTTAACTTATAAAGCTCCTACTATAAGAGTGAACATGTTTA CGCAATTGATTTTGATATCTATGAAATGTAAGTGTAGAAATATTTATGCATCATTTATGTATATTAGTTTTAGTTAAAAGTCAATGATTGTTAATGCAAG AGTGATGATTGATAGTGTAAAACAACCTTACACTTTTGATGCACAGACTATTTCTCTTAAAATAAATCCTCTTAGATTTTTGTTTAGTTAGTTGTTGCAA TTAGGAAGAACTATGGCTATGCACTTGTAATTGTTTTTTTCCGATTTTGTGTTTATCGGTTCCTTTATGACAGTACCATCCTGATGTGAACAAGGAACCT GGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATACGGTGAGGCTGGAGTCA AGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGACTAATCCATTTGATTTATTTGAGACTTTTTTTGGGCCAAATATGGGTGGATTTGCTGGCATGGA TTCAACTGGATTTGGAACACAGCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCGTTGGATTTTTCTGAGGCAATTTTTGGAACA GAGAAAGAATTCGAGCTTTCCCATTTAGAAATATGTGAAGTCTGTACGGGTACAGGAGCAAAGATAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTG GGAGGGGTCAGGTGATGAGGACTGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTATGTCCAAACTGTGGAGGGAATGGTGAAGTCATATCTGA ATATTGTCGTAAATGCAGCGGTGAAGGTCGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGTTCCTCCCGGGGTTAGCTCAGGCAGTATTCTAAGAGTT GCTAGGGAGGGTGATGCTGGACCAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAACGTGGAAGAGATACCAGGAATTCAAAGAGATGACATAA ATCTCCGCTCAACAATATCCATCAGTTATCTAGATGCCATAATCGGGGCTATTGTGAAGGTTAAGACAGTTGAAGGCACTTCTGAACTACAAATACCTTC GGGCACCCAACCTGGAGATGTCCTTGTCCTTGCAAGGAAAGGTGTACCGAAATTAAACAGACCATCAATACGCGGTGACCACTTATTTACAGTTAAAGTT ACTATACCGAAACGGATTAGCACAAAGGAACGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGCACAACAAGTAGCCGTTCAGTATCTCGCCCTAAAACTA ACTCTTCCAGAAGTAGTGAAGGCCCTTTAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTTCAGAAGAAGTTGAACAAAAAGAGGACCAAAATGATAT ATGGAAGGCATTAAAGGACTTAGCTGGGTCCGTAGCAAATGGAGCTGTAAAGTGGCTGAAAGATAATCTCTAGTCGCATTGATTTATTAGATGGTCCAGA GTCTTCAGGATGCAGCTTATCTAATTGTGGCTCAAGTTTTAATGATTCCAACAGCATCTTCAACTATGCAGGCATTTTTGTTGGGTGCTTTAACTGAAAA TTGTTCTCCACACAGAAATGGGTCATGCATATTCTTTTATTTGTAAATTTTGGCACAAAGACCATGTATACAGAACCACTCGTTCACGGATCTTCAAATT GTACTACATGAGCATGTTGCGGTAGAAAAAGGCGGTGTATGCCTGACTTGAAGTTTAAGGTCTATTTGAGTCCTATAGTTAGTTTTCATCAAGTGAATCC TAATGTTGAATTAGGGGGAATTTTAGCTTTATAAAAGCTGTTTCCAATTAGGACCTTGTAAGCGTATTTCTTTCATTTTTTGTTGGTAAAACCATGACAT TTTGTAGTATCCTTTTGGTGTAAGACTAATTTTTGTTTGCATGCTGATCCCAGGTATAAGATGTTTCTAGTGTATTGTAAAAGGATCAAGGTCCTCCCTC ACCTGTTGGTAGAAAGCAATATCAAATATGATCAAACTTATTTATGTTGTTATGTTTATTTAAGTTAAACATATAAATAAAGGGTGAAGCTTTGCTGAAT CAAAAAA
• Tissue: pods
• Gene name: LI_gene_167843;
• Additional information: details;

Expression of Ll_transcript_467475

FPKM

• PAB: 0.8
• PNAB: 0.3
• PS1: 0.3
• PS2: 0
• PS3: 0.3
• PW1: 0.1
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467475

• Blastp: Chaperone protein DnaJ from Thermosynechococcus with 54.14% of identity
• Blastx: Chaperone protein DnaJ from Acaryochloris with 54.22% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (tll0790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448083.1)
• Pfam: DnaJ C terminal domain (PF01556.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;