Ll_transcript_467478

• Id Trinity: TRINITY_DN49263_c4_g2_i6
• Name Transcript: Ll_transcript_467478
• Sequence: CTCAAGCACCACCCCTTATCTCATGGCCCCACAATCTTTTTTCATTTCTACCAATATCATCGCACCATAAAGCCTCACCCTTTTCATCCCCATTTCCTCA CACACCATCGTTACTCCTCTGAATATAAATCCATCAAACGAATAAACGCTATGGACAAATAACACAAAATCTTCATCTTCTATTAACATCTTTCTTCAAT TCAATGGCTCTTATATCTCTCTCACTTCTTCCCTCTCTTCTTCCACACTCTTCTTCTTCTTCTTCTTCTTCATGTGCTGGTGTGCTTCATTTCCGTTCCT ACAACAACAACAATAACAACAACTTCGTTTCGATTAATTCTTCTTCTTCTTTTACTTCTTCAAGTTCTAATATCGCTCGGAGTCGAAGTCGCCGCCGATT TCAGACGCTAGTTGTAGCGGCTTCCGGCGATTACTATGCTACTCTTGGAGTCTCTAAATCTGCTACTGTTAAGGAGATTAAATCTGCTTATCGAAAGCTA GCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGA GGGCTTTGTATGATCAATACGGTGAGGCTGGAGTCAAGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGACTAATCCATTTGATTTATTTGAGACTTT TTTTGGGCCAAATATGGGTGGATTTGCTGGCATGGATTCAACTGGATTTGGAACACAGCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGAT TTCTCGTTGGATTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTCGAGCTTTCCCATTTAGAAATATGTGAAGTCTGTACGGGTACAGGAGCAAAGA TAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTATG TCCAAACTGTGGAGGGAATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGCGGTGAAGGTCGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGTT CCTCCCGGGGTTAGCTCAGGCAGTATTCTAAGAGTTGCTAGGGAGGGTGATGCTGGACCAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAACG TGGAAGAGATACCAGGAATTCAAAGAGATGACATAAATCTCCGCTCAACAATATCCATCAGTTATCTAGATGCCATAATCGGGGCTATTGTGAAGGTTAA GACAGTTGAAGGCACTTCTGAACTACAAATACCTTCGGGCACCCAACCTGGAGATGTCCTTGTCCTTGCAAGGAAAGGTGTACCGAAATTAAACAGACCA TCAATACGCGGTGACCACTTATTTACAGTTAAAGTTACTATACCGAAACGGATTAGCACAAAGGAACGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGCA CAACAAGTAGCCGTTCAGTATCTCGCCCTAAAACTAACTCTTCCAGAAGTAGTGAAGGCCCTTTAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTTC AGAAGAAGTTGAACAAAAAGAGGACCAAAATGATATATGGAAGGCATTAAAGGACTTAGCTGGGTCCGTAGCAAATGGAGCTGTAAAGTGGCTGAAAGAT AATCTCTAGTCGCATTGATTTATTAGATGGTCCAGAGTCTTCAGGATGCAGCTTATCTAATTGTGGCTCAAGTTTTAATGATTCCAACAGCATCTTCAAC TATGCAGGCATTTTTGTTGGGTGCTTTAACTGAAAATTGTTCTCCACACAGAAATGGGTCATGCATATTCTTTTATTTGTAAATTTTGGCACAAAGACCA TGTATACAGAACCACTCGTTCACGGATCTTCAAATTGTACTACATGAGCATGTTGCGGTAGAAAAAGGCGGTGTATGCCTGACTTGAAGTTTAAGGTCTA TTTGAGTCCTATAGTTAGTTTTCATCAAGTGAATCCTAATGTTGAATTAGGGGGAATTTTAGCTTTATAAAAGCTGTTTCCAATTAGGACCTTGTAAGCG TATTTCTTTCATTTTTTGTTGGTAAAACCATGACATTTTGTAGTATCCTTTTGGTGTAAGACTAATTTTTGTTTGCATGCTGATCCCAGGTATAAGATGT TTCTAGTGTATTGTAAAAGGATCAAGGTCCTCCCTCACCTGTTGGTAGAAAGCAATATCAAATATGATCAAACTTATTTATGTTGTTATGTTTATTTAAG TTAAACATATAAATAAAGGGTGAAGCTTTGCTGAATCAAAAAA
• Tissue: pods
• Gene name: LI_gene_167843;
• Additional information: details;

Expression of Ll_transcript_467478

FPKM

• PAB: 11
• PNAB: 13.3
• PS1: 7.3
• PS2: 5.3
• PS3: 7.8
• PW1: 7.6
• PW2: 6.8
• PW3: 6.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467478

• Blastp: Chaperone protein DnaJ from Cyanothece with 55.12% of identity
• Blastx: Chaperone protein DnaJ from Cyanothece with 55.12% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (PCC7424_0560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448083.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;