| Id Trinity | TRINITY_DN49265_c0_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_468391 |
| Sequence | CTCTCTCACTCTCTCTCTCTCTCACTCTCTCTCTCTCTCACTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTAACATAACACAGAGGGAAGAAGGT GGTTCTAAAGAGTGAAAGAAGAAAAACTCTTATTACATAATTAGATTATTTGAGAGAGAATGGATTCAGATCAGGGGAAGATTTTCATTGGTGGGATTTC ATGGGACACTAACGAGGACAAGCTTAAGGACTATTTCGGAAACTACGGTGATGTCTCTCACGCTTCTGTTATGAGGGACAAGATCACAGGCAAGCCCAGA GGTTTTGCCTTCGTTGTTTTTTCTGATCCATCGGTTATTGATAGGGTTCTTCAAGACACCCACGTTATTGATGGGAGAACGGTCGATGTTAAGAGAGCCC TCTCAAGAGAGGATCAACAGAGTTCTTTTAATTCTAGGAGTGGTAATTCCAACTCTGCTAGGAACTCTGGAAATGGTGGAAATATCAGGACCAAAAAAAT ATTTGTTGGAGGGTTACCTCCCACCCTAACTGAAGAAAAATTTCGTGAATACTTTGAGGCTTATGGCCAAGTAACTGATGTAGTAGTCATGTATGACCAG AATACTGGACGCCCTCGAGGATTTGGGTTTATTTCTTTTGATAATGAAGACGCAGTTGACAGTGTTTTGTACAAGACATTTCATGAATTAAGTGGTAAAA ATGTGGAGGTAAAGCGTGCACTTCCCAAGGATGCTAATCCTGGTGCAAGTAACCGCATGGGTGGTGCAGAAGGTGGTGGGTATCATGGCTATGGGGCATC AGGAGGCAACCAAAATGCATATGATGGTCGGACAGATTCAAGTAGGTATACACAGCCTCAGAACAATGCAAGTGGATTCCCACCATATGGTTCTTCTGGG TATACTGCTCCTGGGTATGGGTATGGTGCTGCTAATAATGGCATTGGTTATGGTGCATATGGAGGTTATAGTGGTGCCACTGCTGGGTATGGTGGACCTG CTGGTGCATCATATGGGAACCCAAGTGTTCCTAATGCTGCTTATCCTGGTGGTCCTCCAGGTGGCCCGAGGAGTTCATGGTCTGGTCAGGTTCCCTCTGG TTATGGGTCCGCAGGCTATGGGAGCACTGGTCCTTGGGGTACCTCAAATGGTGGTGCTGGAACTGGTAGTGGTGGCCCTGGTTCAGCAGCTGCAGGTCAA TCCCCGAGCGCAGTTGCTGGATATGGGAATCAAGGTTATGGATATGGTGGGTATAGTGGAAGTGATAGTTCTTATGGGAATCCAGGTGCTTATGGAGCTG TTGGAGGGCGTTCCGGGAGTGCCCCAAATAATGAACTACAAGGCAGTGGTGGCAGCTATATGGGAAGTGGTTATAGCGATCCAAATGGAAATTCAGGGTA TGGAAATGCAGCTTGGAGGTCAGAATCAACACAAGCATCAGGAAATTATGGGACTCAGGGAAATGGTGCTGCCCATGCTGGGCAAGGTGGTTATGGTGGT GGCTATGGCGGTTCACAGTCCAGACAATCCCAACAGCAATAGTTTTGGCAGTTATATCTCGTACTGGATCTTCAACTTCAACTTGTGGATCCCCAATTTT TATATCTTAAATCATGAGTTCACCCAAATTTTCTTCCTAGCAGCAATGCAGTGGCTGAAGTTTGATGATTACACAACGGGACTGGTTACATTGCTCAAAT TGTTGTAGTTTGCAGTACTTGATTCCTTTAGTTTATAATAAGTATTTTGAAAAGATAGTAGATTCTACTTTCTATTTAGTATTCTGTTTTGCTTATAGCT TTAAATTTGTGTGCTTATGATTTAGCTGTTTGGAATTGTTAATTGTCATATTGAAGCTTTTAGTGGCATAATTCACCTTTATGTTGGTTTTGATGCTGTT AATTTTTGTGTTATCTTGGTGTTCTCATCTTGTTTCCCTTTGTGTGTTATCCTGCATCTGACTACAGTTAGTCGGTACGAAATATTTGTGTAGAGATACT CATGCATTAATTGTTATAACAAGTAGAAATAAGGATGGTATTCTGGCTATATGTACCGATAGCAGTAGCATTAGCAGTAGCAGTGGCAGTGGACACTTGG GTTGATCACTTCGTATTGGGTAGCGTTAATGGTAGTGGTAGTTGAAACTTTGAGGATGTTTTATTGATTTCCCCCTGCATTGGCACTTGTGTTGTACAGG AGGACAGGTTCACGAGTTCTGAAGTGGAGCCAAGTGTCCACTCATGGCGAACTTTAGCTTCATGATGGCTTAATCAGGGGCTATTTAGCACGGAATGTAC GTAGTTCAGTCATATTGTGTTTTTCTACACTTGTGCATCATCAAATATGGAGATATCTGGCTTTACATGTGATAAACTTTCCTATCCTTCAACCCGGTTT GTGGTACGTTGACTTGAGTAGTTAGTTGTTAATTGTTAAAATTTTAACATGTTTAGGTGGGTGTGCTTACTGTTACGGAGAGATTTTTTCTCTACAAAAC AGTTTTGACTGTGGTGGGTAATTTTTTTAAGCTAGATTTCTTCATTATGTCAGTAATATTATTTTTTGGTCCCTGAAAATGCAAGAAGCTTTAGTTTTGG TTCAAGTTTTTTTTGAAAAAAAGAAGTCATCGCCGATAGTGAGCCTCAATGAAGTGGTGGTCACATGACAGTTCTCGAGCACCGACACATTGTTTCAGTG ATTTTCATTTGCACCACACAAGCAATTAACACAGGCTCACTAGCAATGATGACAATGAAGGACTAAAACCAAAAGGTTCTATATTTTCAAAGGATCAAAA ACATTAAAGCCCTTTTCTATATTCAATCCTCCTTAATATCATTTATGGTTATCTTCAGTTTTAGTCTTTTAGCTTTTGTTTCACTTGGTACATTAGTGTT ACTTTCTGGCATCTTAATATACAGGAATCAGATGAAGTAGATTATGTTCAATTCAGTAGGTTTTTGGAGAGTATACTCTATAGTGGTGTGATTGTCTTCT TCTGACCCTTGTTTACTTTTTAGTTGAAAATGAAAAAGGGAAAAAAACCAACATGCTCCTGCACCTCAGTGTTCAACATCTTTGTTAATTTTGTAGTAAG CTTGTCTTTTTTGATAAAGTAGAACTTGTGTTTGAGATGAAAAATTGATGAAGTCATGAAAGAAGAAATGGAAGTTTATAGAGAGTGTAATATCTATGCA TTGTTCATGTAAATATTTATATACATTCAATATATCATTCGTCATTTATCATTTATAAACATTAATGATAAATGATACACCGATTGTGAGTAAAACTTTA ACATGTGCATGAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167855; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468391
| Blastp | Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 60.68% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 64.17% of identity |
| Eggnog | Rna-binding protein(ENOG410YA8Z) |
| Kegg | Link to kegg annotations (AT4G14300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449967.1) |
| Pfam | RNA recognition motif (PF16367.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |