Ll_transcript_466494

• Id Trinity: TRINITY_DN49266_c3_g1_i13
• Name Transcript: Ll_transcript_466494
• Sequence: ATAATCTACACTTTGTTAACTGTCATTTGTGTTTATTCTACAGTTGCTAATAAAATAAGCTATTGGTTTCATACCCTTAAAAGCTAGTATTGTTTATAAA GCACCCGAGGCAGGGGAAACAGTGCCATCATTCTGAAGAAAAGAGAGTTGACAAGGTAGAACAGAAGAGTATCTTTGTTTGTAGTGCAGCAATGGCAACA CCAAAAGAGTCATATGAGAATCAACAACTAGCGATTGTGCAACACGTGAGGAACTCGGGGATGATTAGTTCCAACCCGAGCCCATTAATGGATGATAAGG AAGAGGAGATGTCAAGATCAGCTCTTGCAATGTTCCGCGCAAAGGAAGAAGAATTCGAGAGGAAGAAAATGGAAGTGAGGGGTAAGGTCCATGCTTATCT CGGTCGAGTGGAGGAGGAAACTAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTCATAGATCCATTGAGGAAAGAAGTTGGAATAGTTCGAAAG AAGATAGACAATGTTAACAAAGAGTTAAAGCCAATGGGCCAAACATGCCAAAGAAAGGAGAGGGAATACAAGGAAGCCCTTGAAGCTCTCAACCATAAAA ACAGGGAAAAAGGTCAACTTGTTACAAATCTAATGGAGATGGTGAACGAAAGTGAGAAGCTGAGGATGAAGAAACTGGAGGAACTAAGCAAAAACTTAGA CACTCTGAAATGAGATGCTAATAAAAAAACTCACCCTGGCACAGGAGAGAGAGAAAAAAGAGATTAGCAGCGTGTGAAAGCGTGGATGAAAATGTTAGGT ATGGACGAGCGCACTGTAACATCAAACCCTAACGACAATGGCGAAGGAAAAATGAAGAAGAAACCGAAGGTGGTTGTCATCACCGGACCCACCGCTTCCG GAAAATCCAAACTCGCCGTCGATTTAGCTTCCCTCTTCCCAATCGAAGTTATCAACGCTGATTCCATGCAAGTCTACCGTGGTCTCGATGTTCTCACCAA CAAAATCCCCTTCTCACAACAAAACGGTGTGCCTCACCATTTGTTGGGTTCTATAAGTCCAAACGTAGAATTCACTGCTAAAGCGTTTCGAGATTCTGCT ATTCCTATCATTGATGATATATTGGATCGCAATCATTTGCCTGTTATTGTTGGAGGTACAAACTACTATATCCAGGCTCTTGTGAGTCCATTTCTTCTAG ATGATTTGGCAGAAGATATGAATGAAAGCTGTTTGGACGACTTGCCTGGTACCACACAGTGTGATATCAGTTTCATTGCTGAAAATGACTCTTTAAATGA TAGTTACGATCTACTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCACCCAAATAACCATAGAAAGATAAACCAATATATTAGCTTGTATGCTCGT ACTGGTGTTCTTCCTAGCAAAGTTTTTCAAGGAAAGGCAGCAGAGGGCAGAATTGGGGTCAAGTTGATAACTTAAGATATGATTGCTGTTTCATATGTGT GGACGCATCTCTCCCTGTACTCGACAAATATGTTGAGCAGAGAGTAGATTGCATGATGGATGCTGGATTACTGAATGAAGTCTATGCCATCTACAATTTG GAAGCAGATTATACTAGAGGTTTGCGGCAGGCCATTGGTGTCCGTGAATTTGAGCCCCTTCTTAAAACTTGTGTTGTTGAAGACATTTACAAAAAAGAGA AGGAATTGACTGGGTCCAGCACAGAAAAGGGTGAGACATTGCTTGATAGTAATCTGAGGGAGTGGTTGATATCTTCCTCTGATAGTAAATCCATAATTCT TTTGGAAGAAGCAATTGAAAAAGTAAAAGTTAATACCCGAAGACTTGTCCGTCGTCAGAAAAGGATGCTCAACCGACTGCAAACACTGTTTGGTTGGAAC ATACACTATGTTGATTCAACGGAATCAATATCAAGAAAATCAGAAGAGGTATGGGCTGGCCAAGTGGTTGAGTCTGCCATGAAGATAATTAGATCATTCC TGAGTGAGAATGAAAGCTTGACATCCACCGTTGAGTTGTCTAATATGACTGGGATGAAAATAATCCAGAGGGACCTCTGGACTCGATATATATGCAATGC CTGTGGAGATCGGGTGCTTAGAGGATCACATGAATGGGAGCAACACAAACAAGGTCGTGGGCACCGAAAACGTGTTTCTAGTCTCAACAGGAAGGCACGG GGTCTTACTTTCGTGGAACAAAAGCTGGAGTATTCCGAGTGCAACTAGCTTGAATATATCTTCTAAATTTGCAGTTGACTCTGCTTAGCTGTTAGCATGA AGAAGATCAACCGCTGCAGTTTATGTCATTGACACCATACAATTCCATGTCGTGTCACATGAGTAATTTTCTTTTTAAATTCTTGTGGCGTAACATTCAA GTTTTTAATTCCTATTATATTTAAGGGTCATATGTTAACCTGCTGAGGATAAGGAGTGAAATTAAGGTATAGGTAAGGGTCATATGTTAAACTAAATTCA TTAGTACTTGTAGGAATAAATTCTTTATTTTTTCAATATAAAGTTATGCTCATTTATGCTTAAAA
• Tissue: pods
• Gene name: LI_gene_167859;
• Additional information: details;

Expression of Ll_transcript_466494

FPKM

• PAB: 1.4
• PNAB: 3.2
• PS1: 2.8
• PS2: 2
• PS3: 3.6
• PW1: 3.7
• PW2: 3.3
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_466494

• Blastp: RAB6-interacting golgin from Rattus with 32.79% of identity
• Blastx: tRNA dimethylallyltransferase 2 from Arabidopsis with 61.9% of identity
• Eggnog: Golgin, RAB6-interacting(ENOG4111VTM)
• Kegg: Link to kegg annotations (304923)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448813.1)
• Pfam: Transcriptional activator (PF04949.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;