| Id Trinity | TRINITY_DN49268_c1_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_466426 |
| Sequence | GTTAAATAACAACGATCATGTCAATTACATTCTTCAGGATATGGTTTACAGGTTGCAATGTTAATATTTATTCCTCGAAACAAAGCATGATTATCCATTC AACCCTGATCTCCACTGTAATGCTTACACGTGTCCCACGATAAGTACCCACAACAGTATTGGCCGACGATTCAAAAAGCAGCACGTGTCCCAGCCTCACA CGCTTCAAGCACAATCTCTCTTCTTCCCTTCTCTGTACTGTGCTGAATGTTGAATTGGAACTCACTCTTACCATGACCACTTCTAACGCTTACTTTTCTT CTTTCCCTTTCTCTTCTTCTTCTCCCAGCGTCACCAATAAGACTAAGACTATGTCTATTCTCTCTCCATCGTTATCCACACTCTTCGCTTCTCCAACTCT TAGGGTTTCTTCTTTTTCTTCTTCTTCAATCTATTCGAGATCTGTAACCGCTTCTTCACCTGTTCTTGCTGTTTCTTCTTCATCGCTCTTTTCTATCAAA GGTGAAGACAACGCTGCTTCAGCTTCACCGAACGATTATTTTCCCGCCAAAATGTCTGCTACCGTTTCTTCTCGCACTTTTCTTGACGCTCAAAACGAAC AAGAGCTTCTTTCTGGAGTAAGGAAGGAAGTAGAAGCAGGATCCCTGCCTCCTAATGTTGCTGCAGGGATGGAAGAACTGTTCGAGAACTACAAAAGCGC GGTTTTTCAAAGTGGAGATCCCAAGGCAGAAGAGACTGTATTGTCAAATATGTCTCGTCTTTTAGATCGCATATTTCTGGATGTGACAGATCCCTTTGTC TTTCAACCACACCACAAAGCAAAGAGAGAGCCTTTTGACTACTACACGTTTGGTCAAAACTATATCCGCCCTTTAGTTGAGTTCAGGTGAAGTTGCAAGT TATAGTTTCTACTGCTTCATCTATTTGTCATTGATCATTCTAGTTCATTTATATGACTTTTATTACCAATAGCCTACACATGTGGTCTTTTAGATTTTTC GTCCATGAACTTTATATCCTTGACTTAGGCATTTTCTGTTTAGCAAGTACTACTACAATGTTCTAAGATATGTAGGACTTGTGAATGGATTGCATTGGGC GAGTATAAGAGATAGTGAGATACATCATGCATGCATCGATTGTTTTGGGTGAGTTGACATGCAATGCACAAAGAGAGGTCCTATTGGAATTTGTTAGTCT CCACATGTTTAACATGCGCTGTTTCAGCAAATGATTCTTTTGGGAATGACTGTTTTGTTAATGCAACTTTAATGATTTCTATCTTTTTTCTGTGGTGTAC AGTCTTGTACTTCCGAATAAAGCATATCCTGTGTGAATCATTGTGTTGTTACCTTCCAATAGTTGACTAAGCGTTTTGATATCTGTTACTCTTTTGTTTG GGGAATAGTGATATCCTATGATGCATCAGGATGTGGCCTTCTGTGTTGCATTTCTGGAAGTATAATCACGACGTTAACAATCTGTATAACCCATTAGAGT GAGCGAATGATGACAGTTCCATCTAGTTTCACCATGTAGCTTTTCTTAAATCTGATATTTTTGTTGCAGAAATTCTTATGTTGGCAACATCTCCGTTTTC ATTGAAATAGAAGAGAAACTTAAGCAGGTGCCAATTTCTTATATATTTTCTATTTGTAAAATTACTTGTTTGTTTACTGTAAAATATTGTTAGAATTTGT AAATAATCTTTTTCCACAGAGTAGGGGCGAGGGAAATAATAGAAAGTCTTGTGTTATGTTTTGTGACTACCTTAAGTTCTCGCCCAAACTGGAAGGCTGG GTCTATGCATGGAGACATGACATTTTGGAGTTTATGTCTGTCAGATATGTATAAGTCTTAAGGTTGAGGTTGGGTCTATGCATGGAGACATGACATTTTG GAGTTTATGTCTGTCAGATATGTATAAGTCTTAAGGTTGAGGATGATATGCATAGTAACATTGTTACTAGTTTAATATGCTATCATATGCATGACACATG AGCTTTTTAAAAAAAATCTCAGATCTGGATCTTGGTAGCTGATGCCAATCAGGTGACTGTTCTGGTTGTTTTCATTTTTCGATTGCTATTTTGATCCGTT TCATTATGATAGTAGGAACTGGTCTTTATCATTGTCTGCATTGCTATTATATAACAAAAAAAACACCATTAGGCTTTTCCCGTCGCAAATGCACTTTGAA TTCATCTAGTTAGATATTCAGTTGATGCTTCTGATGCGGCAGTTGTATTATACATATCTAATTTTCCCCGGTTAGTACTTCTATTTCTTAATGGTTGCAT ATGAGAGATAAATCACTGGAAAGAAAAATCCTTTACCTGTTCATGAAATGTCAAACTTGATTCTGGATTTCATATTTATGGTTTCTTGTGTATATTTGCC CTATGTTAGCACATTCATAGAGGTGTGAAAATTTCTGAATGACTGAAAAAATTACTGCAGGGACACAATATCATCTTGATGTCAAATCACCAAACTGAAG CAGATCCAGCAATTATTTCGCTGCTGCTTGAAAAGCGACTATCATATTTTGCTGAAAACTTGACTTACGTAGCAGGAGATAGAGTTGTAACAGATCCTCT GTGCAAGCCATTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGAACTTGTAGAGATGAAAAGAAAAGCAAAC ACACGAAGTCTGAAGGAGATGGCTATGCTTTTAAGGAGCGGATCACAATTAATCTGGATTGCCCCAAGTGGTGGTAGGGATCGACCAGATCCCGCCAATG GAGAATGGTTTCCGGCACCCTTCGATCCTTATTCAGTTGATAATATGCGAAGGCTTGTTGACCATTCTGGTCCACCAGGTCATGTATATCCCTTGGCAAT ATTGTGCCATGATATAATGCCCCCTCCGATGAAGGTTGAAAAGGAAATTGGGGAGAAAAGAATTATTTCTTTTCATGGGACTGGCTTATCAGTGGCTCCA GAGATAAGCTTTTCTGATACAACTGCTGCTTGTGAAAGTCCAGAAAAGGTTTGCAAATTTTTTTCAGTGACTACCCTCCAAATTTCTCTGAAAAGTCACC TACTTTCGTTTTGCGATCCTTGAAATGAGATTTGACCACACAAGAATGTAACACATGACATCATTTATAAGCTGACCCCACCTAGTGGGAGAAAGGCTTG GTTGGTTGTGGTTGTTGTTGTAAGTGGTATTTTGTTTTTATCATTGGTCATGCTGCACACTTGAACTCCTCTTAAGGCTTATAAGGAGGGAGCCCTCCCA CACTTGAGTGTGCCATTTGAATGACAATACTGTGATGCCCCACAAAAAGAACAGTACACCTTGTGAACCTATGAACTACCGTCTTGTGAAACTCACACTT GTGCTGGCTAAGGAAGCATATTCAAAAGCTGTATACATTTCTGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACACGGCAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167894; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466426
| Blastp | Glycerol-3-phosphate acyltransferase, chloroplastic from Phaseolus with 84.18% of identity |
|---|---|
| Blastx | Glycerol-3-phosphate acyltransferase, chloroplastic from Phaseolus with 84.06% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421862.1) |
| Pfam | Acyltransferase (PF01553.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |