Id Trinity | TRINITY_DN49268_c1_g1_i5 |
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Name Transcript | Ll_transcript_466408 |
Sequence | GTTAAATAACAACGATCATGTCAATTACATTCTTCAGGATATGGTTTACAGGTTGCAATGTTAATATTTATTCCTCGAAACAAAGCATGATTATCCATTC AACCCTGATCTCCACTGTAATGCTTACACGTGTCCCACGATAAGTACCCACAACAGTATTGGCCGACGATTCAAAAAGCAGCACGTGTCCCAGCCTCACA CGCTTCAAGCACAATCTCTCTTCTTCCCTTCTCTGTACTGTGCTGAATGTTGAATTGGAACTCACTCTTACCATGACCACTTCTAACGCTTACTTTTCTT CTTTCCCTTTCTCTTCTTCTTCTCCCAGCGTCACCAATAAGACTAAGACTATGTCTATTCTCTCTCCATCGTTATCCACACTCTTCGCTTCTCCAACTCT TAGGGTTTCTTCTTTTTCTTCTTCTTCAATCTATTCGAGATCTGTAACCGCTTCTTCACCTGTTCTTGCTGTTTCTTCTTCATCGCTCTTTTCTATCAAA GGTGAAGACAACGCTGCTTCAGCTTCACCGAACGATTATTTTCCCGCCAAAATGTCTGCTACCGTTTCTTCTCGCACTTTTCTTGACGCTCAAAACGAAC AAGAGCTTCTTTCTGGAGTAAGGAAGGAAGTAGAAGCAGGATCCCTGCCTCCTAATGTTGCTGCAGGGATGGAAGAACTGTTCGAGAACTACAAAAGCGC GGTTTTTCAAAGTGGAGATCCCAAGGCAGAAGAGACTGTATTGTCAAATATGTCTCGTCTTTTAGATCGCATATTTCTGGATGTGACAGATCCCTTTGTC TTTCAACCACACCACAAAGCAAAGAGAGAGCCTTTTGACTACTACACGTTTGGTCAAAACTATATCCGCCCTTTAGTTGAGTTCAGGTGAAGTTGCAAGT TATAGTTTCTACTGCTTCATCTATTTGTCATTGATCATTCTAGTTCATTTATATGACTTTTATTACCAATAGCCTACACATGTGGTCTTTTAGATTTTTC GTCCATGAACTTTATATCCTTGACTTAGGCATTTTCTGTTTAGCAAGTACTACTACAATGTTCTAAGATATGTAGGACTTGTGAATGGATTGCATTGGGC GAGTATAAGAGATAGTGAGATACATCATGCATGCATCGATTGTTTTGGGTGAGTTGACATGCAATGCACAAAGAGAGGTCCTATTGGAATTTGTTAGTCT CCACATGTTTAACATGCGCTGTTTCAGCAAATGATTCTTTTGGGAATGACTGTTTTGTTAATGCAACTTTAATGATTTCTATCTTTTTTCTGTGGTGTAC AGTCTTGTACTTCCGAATAAAGCATATCCTGTGTGAATCATTGTGTTGTTACCTTCCAATAGTTGACTAAGCGTTTTGATATCTGTTACTCTTTTGTTTG GGGAATAGTGATATCCTATGATGCATCAGGATGTGGCCTTCTGTGTTGCATTTCTGGAAGTATAATCACGACGTTAACAATCTGTATAACCCATTAGAGT GAGCGAATGATGACAGTTCCATCTAGTTTCACCATGTAGCTTTTCTTAAATCTGATATTTTTGTTGCAGAAATTCTTATGTTGGCAACATCTCCGTTTTC ATTGAAATAGAAGAGAAACTTAAGCAGGTGCCAATTTCTTATATATTTTCTATTTGTAAAATTACTTGTTTGTTTACTGTAAAATATTGTTAGAATTTGT AAATAATCTTTTTCCACAGAGTAGGGGCGAGGGAAATAATAGAAAGTCTTGTGTTATGTTTTGTGACTACCTTAAGTTCTCGCCCAAACTGGAAGGCTGG GTCTATGCATGGAGACATGACATTTTGGAGTTTATGTCTGTCAGATATGTATAAGTCTTAAGGTTGAGGTTGGGTCTATGCATGGAGACATGACATTTTG GAGTTTATGTCTGTCAGATATGTATAAGTCTTAAGGTTGAGGATGATATGCATAGTAACATTGTTACTAGTTTAATATGCTATCATATGCATGACACATG AGCTTTTTAAAAAAAATCTCAGATCTGGATCTTGGTAGCTGATGCCAATCAGGTGACTGTTCTGGTTGTTTTCATTTTTCGATTGCTATTTTGATCCGTT TCATTATGATAGTAGGAACTGGTCTTTATCATTGTCTGCATTGCTATTATATAACAAAAAAAACACCATTAGGCTTTTCCCGTCGCAAATGCACTTTGAA TTCATCTAGTTAGATATTCAGTTGATGCTTCTGATGCGGCAGTTGTATTATACATATCTAATTTTCCCCGGTTAGTACTTCTATTTCTTAATGGTTGCAT ATGAGAGATAAATCACTGGAAAGAAAAATCCTTTACCTGTTCATGAAATGTCAAACTTGATTCTGGATTTCATATTTATGGTTTCTTGTGTATATTTGCC CTATGTTAGCACATTCATAGAGGTGTGAAAATTTCTGAATGACTGAAAAAATTACTGCAGGGACACAATATCATCTTGATGTCAAATCACCAAACTGAAG CAGATCCAGCAATTATTTCGCTGCTGCTTGAAAAGCGACTATCATATTTTGCTGAAAACTTGACTTACGTAGCAGGAGATAGAGTTGTAACAGATCCTCT GTGCAAGCCATTCAGTATTGGCAGGTTCATTTCACACTTCTGTTTATTTAACTTGAAATTTATGCAGATATATTTCCTTTTAATAAATGAAGTTGACTTT TCCAGTTTGTTACATAACACCTTTTTATAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGAACTTGTAGAGATGAAAAGAAAA GCAAACACACGAAGTCTGAAGGAGATGGCTATGCTTTTAAGGTATATCTACTAGTTTATAGCTGAATCACCTTTTCCTTTATAGATTCCAATTAAGACTG TAATGCATCCATGAGTCCATGTTTTATAGAAATCTTTAAACATAAAAATTGAAATCTAAAGGGAAGAGCAAGTAATAGGTGGAGTATGCTGCACTTTGAA TGGAGCGGATCACAATTAATCTGGATTGCCCCAAGTGGTGGTAGGGATCGACCAGATCCCGCCAATGGAGAATGGTTTCCGGCACCCTTCGATCCTTATT CAGTTGATAATATGCGAAGGCTTGTTGACCATTCTGGTCCACCAGGTCATGTATATCCCTTGGCAATATTGTGCCATGATATAATGCCCCCTCCGATGAA GGTTGAAAAGGAAATTGGGGAGAAAAGAATTATTTCTTTTCATGGGACTGGCTTATCAGTGGCTCCAGAGATAAGCTTTTCTGATACAACTGCTGCTTGT GAAAGTCCAGAAAAGGTTTGCAAATTTTTTTCAGTGACTACCCTCCAAATTTCTCTGAAAAGTCACCTACTTTCGTTTTGCGATCCTTGAAATGAGATTT GACCACACAAGAATGTAACACATGACATCATTTATAAGCTGACCCCACCTAGTGGGAGAAAGGCTTGGTTGGTTGTGGTTGTTGTTGTAAGTGGTATTTT GTTTTTATCATTGGTCATGCTGCACACTTGAACTCCTCTTAAGGCTTATAAGGAGGGAGCCCTCCCACACTTGAGTGTGCCATTTGAATGACAATACTGT GATGCCCCACAAAAAGAACAGTACACCTTGTGAACCTATGAACTACCGTCTTGTGAAACTCACACTTGTGCTGGTACATACTGTAATTTCTTGTAATATG ATGAATACCATGTAGAAGTTAAACTTTCTATGTAATCAAAGCCATTATTCTGTATCCTTGGGCTCTCCGTTTGAATTTACTGATGGTTTTGCCTTGTAAC AATCTTAACTTGAAAAATAGACTGGGTTTTTTTATACTTTATTTTCATTATTTTTTTTTGCAAGATTCTTTTACTTGTTTAATTTGATTGGTGTGATATG GATGTTATATGGTGCAGGCTAAGGAAGCATATTCAAAAGCTGTATACATTTCTGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACACGGCAAAAA AGGATTAGAAGCATCAACTCATAAAGTTTCTTTGTCGCAGCCATGGAACTAGTTCTTGTCTGAAATTCTGAATCTTTTTCATTATACTTTGCTCTGACGA TAAGGTACACTTCTAACTTCAGAGTTTAGAAAACTTCAATTGTACTACCATACATCATATAGGTTAGAATTGGAAACTTTTCTCATTGTTGGGTCAAATA TTCTCTTAGGTGCTGCTGCTGTTGATTATTATTTGATAGAATGGTTGTTGTCATCAAGCAACAGTTGATTAATGCTTTTAATATTATTTTTCATTTTCAA CTGTGTGTAGTTAGTTCCTTGGATTGTTTGACATTTGGGTTCTGTTTTTGTCAAATCGAATACAATCCAGCGTTCCTACCATAAGAATCTGAATTGTACC CAAAAAGAGGTGGCGAGAATCTAAAAAATATGAAGTGATGAAATGCAGGCAATAAATTATACTTCGAGTAATCGAGTTTTCATAGGCTGAGAAACTAGCT AGTTAACCTGTTTGTTACCTGATACTGAACATCTGAACTTTTGGATGGGTCTTATTGTCTCAGGCATTAGGATAAACCAATATATAGAGAAGTAAATGGA AGCTCAAAATAAGATTCTTTTTCTTATCTTCATATGGTTGAATTATGCATTACTGTGCTATAGCCGTTACTTATTTTCATGGCTGAGGACACTTGCTGTT TTTTTAATCATTTAGAGTCAAGTTTCCAGACTTCAATCAAAAGATTTCAATTGATTCTTTCGGAGGAACTGCTAATTACTACAGTGAATGATTAGCTTGA TGGAAATTTGCAGCCAACTATGTTTTTCATATTTCTTTTTATCAGAGTTGAATTCATCAGGAGTCTATCTCAGATGGTTGATATTCAGATGCTTACTGTA CCAGTTCTCTCTTAGTTCCTTTCCAGATCCGTCCATTCACTGATAAAAACGCTACATATACTTTTTTTGGTTACAATTTGGTGTATCAGGCTCTCTTATT AGCTAGCTGAAACGATAAAAGGTAATCACTTTCATTTGTAATTGTAAGTCAAATTCGTTCCACTATAGATGAGTAGCTGTTATTTGTTAATATTAGAACC TCCCTCTTAGAATCAAATTGTTTAGACCGCAGCTCTTCATGAAGTGGTTAAAATAAAATGGAAGATTATTCATTTTGTTAAAATCGCTACATTTGGTCAA TTCCAAGTTTATCTTCATCTGCATCAATAGCTATACCCCAATGTACTCAAAACTAAAGCTATCCTTTGTGGAACTCTGTTTTAGGCAGTATGGTGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_167894; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466408
Blastp | Glycerol-3-phosphate acyltransferase, chloroplastic from Phaseolus with 69.34% of identity |
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Blastx | Glycerol-3-phosphate acyltransferase, chloroplastic from Phaseolus with 71.88% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421862.1) |
Pfam | Glycerol-3-phosphate acyltransferase N-terminal (PF14829.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |