Id Trinity | TRINITY_DN49268_c1_g1_i7 |
---|---|
Name Transcript | Ll_transcript_466410 |
Sequence | GTTAAATAACAACGATCATGTCAATTACATTCTTCAGGATATGGTTTACAGGTTGCAATGTTAATATTTATTCCTCGAAACAAAGCATGATTATCCATTC AACCCTGATCTCCACTGTAATGCTTACACGTGTCCCACGATAAGTACCCACAACAGTATTGGCCGACGATTCAAAAAGCAGCACGTGTCCCAGCCTCACA CGCTTCAAGCACAATCTCTCTTCTTCCCTTCTCTGTACTGTGCTGAATGTTGAATTGGAACTCACTCTTACCATGACCACTTCTAACGCTTACTTTTCTT CTTTCCCTTTCTCTTCTTCTTCTCCCAGCGTCACCAATAAGACTAAGACTATGTCTATTCTCTCTCCATCGTTATCCACACTCTTCGCTTCTCCAACTCT TAGGGTTTCTTCTTTTTCTTCTTCTTCAATCTATTCGAGATCTGTAACCGCTTCTTCACCTGTTCTTGCTGTTTCTTCTTCATCGCTCTTTTCTATCAAA GGTGAAGACAACGCTGCTTCAGCTTCACCGAACGATTATTTTCCCGCCAAAATGTCTGCTACCGTTTCTTCTCGCACTTTTCTTGACGCTCAAAACGAAC AAGAGCTTCTTTCTGGAGTAAGGAAGGAAGTAGAAGCAGGATCCCTGCCTCCTAATGTTGCTGCAGGGATGGAAGAACTGTTCGAGAACTACAAAAGCGC GGTTTTTCAAAGTGGAGATCCCAAGGCAGAAGAGACTGTATTGTCAAATATGTCTCGTCTTTTAGATCGCATATTTCTGGATGTGACAGTAAGATTGAAT CCTAGGATGAGCTTTGCTGATCATTTTCATGCCTGTGGAATTTTATTTAAGAAATCTTCATTGCATTTACATATATACAAATTTAGTTTGCTTTTGTTTC ATGGAAAGAATATACGGTTGTTTTTGCTCAAAACATCTGGTTGATTATTAACAGGATCCCTTTGTCTTTCAACCACACCACAAAGCAAAGAGAGAGCCTT TTGACTACTACACGTTTGGTCAAAACTATATCCGCCCTTTAGTTGAGTTCAGGTGAAGTTGCAAGTTATAGTTTCTACTGCTTCATCTATTTGTCATTGA TCATTCTAGTTCATTTATATGACTTTTATTACCAATAGCCTACACATGTGGTCTTTTAGATTTTTCGTCCATGAACTTTATATCCTTGACTTAGGCATTT TCTGTTTAGCAAGTACTACTACAATGTTCTAAGATATGTAGGACTTGTGAATGGATTGCATTGGGCGAGTATAAGAGATAGTGAGATACATCATGCATGC ATCGATTGTTTTGGGTGAGTTGACATGCAATGCACAAAGAGAGGTCCTATTGGAATTTGTTAGTCTCCACATGTTTAACATGCGCTGTTTCAGCAAATGA TTCTTTTGGGAATGACTGTTTTGTTAATGCAACTTTAATGATTTCTATCTTTTTTCTGTGGTGTACAGTCTTGTACTTCCGAATAAAGCATATCCTGTGT GAATCATTGTGTTGTTACCTTCCAATAGTTGACTAAGCGTTTTGATATCTGTTACTCTTTTGTTTGGGGAATAGTGATATCCTATGATGCATCAGGATGT GGCCTTCTGTGTTGCATTTCTGGAAGTATAATCACGACGTTAACAATCTGTATAACCCATTAGAGTGAGCGAATGATGACAGTTCCATCTAGTTTCACCA TGTAGCTTTTCTTAAATCTGATATTTTTGTTGCAGAAATTCTTATGTTGGCAACATCTCCGTTTTCATTGAAATAGAAGAGAAACTTAAGCAGGTGCCAA TTTCTTATATATTTTCTATTTGTAAAATTACTTGTTTGTTTACTGTAAAATATTGTTAGAATTTGTAAATAATCTTTTTCCACAGAGTAGGGGCGAGGGA AATAATAGAAAGTCTTGTGTTATGTTTTGTGACTACCTTAAGTTCTCGCCCAAACTGGAAGGCTGGGTCTATGCATGGAGACATGACATTTTGGAGTTTA TGTCTGTCAGATATGTATAAGTCTTAAGGTTGAGGTTGGGTCTATGCATGGAGACATGACATTTTGGAGTTTATGTCTGTCAGATATGTATAAGTCTTAA GGTTGAGGATGATATGCATAGTAACATTGTTACTAGTTTAATATGCTATCATATGCATGACACATGAGCTTTTTAAAAAAAATCTCAGATCTGGATCTTG GTAGCTGATGCCAATCAGGTGACTGTTCTGGTTGTTTTCATTTTTCGATTGCTATTTTGATCCGTTTCATTATGATAGTAGGAACTGGTCTTTATCATTG TCTGCATTGCTATTATATAACAAAAAAAACACCATTAGGCTTTTCCCGTCGCAAATGCACTTTGAATTCATCTAGTTAGATATTCAGTTGATGCTTCTGA TGCGGCAGTTGTATTATACATATCTAATTTTCCCCGGTTAGTACTTCTATTTCTTAATGGTTGCATATGAGAGATAAATCACTGGAAAGAAAAATCCTTT ACCTGTTCATGAAATGTCAAACTTGATTCTGGATTTCATATTTATGGTTTCTTGTGTATATTTGCCCTATGTTAGCACATTCATAGAGGTGTGAAAATTT CTGAATGACTGAAAAAATTACTGCAGGGACACAATATCATCTTGATGTCAAATCACCAAACTGAAGCAGATCCAGCAATTATTTCGCTGCTGCTTGAAAA GCGACTATCATATTTTGCTGAAAACTTGACTTACGTAGCAGGAGATAGAGTTGTAACAGATCCTCTGTGCAAGCCATTCAGTATTGGCAGGTTCATTTCA CACTTCTGTTTATTTAACTTGAAATTTATGCAGATATATTTCCTTTTAATAAATGAAGTTGACTTTTCCAGTTTGTTACATAACACCTTTTTATAGGAAT CTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGAACTTGTAGAGATGAAAAGAAAAGCAAACACACGAAGTCTGAAGGAGATGGCTATGC TTTTAAGGTATATCTACTAGTTTATAGCTGAATCACCTTTTCCTTTATAGATTCCAATTAAGACTGTAATGCATCCATGAGTCCATGTTTTATAGAAATC TTTAAACATAAAAATTGAAATCTAAAGGGAAGAGCAAGTAATAGGTGGAGTATGCTGCACTTTGAATGGTATCTTTTGTTCCGAGTGACTTTTGATTTGT CAAATGTTCATTGTCTTGGTGTTCCGCTGTTAACGTACTTGCTTTTGATATAGGAGCGGATCACAATTAATCTGGATTGCCCCAAGTGGTGGTAGGGATC GACCAGATCCCGCCAATGGAGAATGGTTTCCGGCACCCTTCGATCCTTATTCAGTTGATAATATGCGAAGGCTTGTTGACCATTCTGGTCCACCAGGTCA TGTATATCCCTTGGCAATATTGTGCCATGATATAATGCCCCCTCCGATGAAGGTTGAAAAGGAAATTGGGGAGAAAAGAATTATTTCTTTTCATGGGACT GGCTTATCAGTGGCTCCAGAGATAAGCTTTTCTGATACAACTGCTGCTTGTGAAAGTCCAGAAAAGGTTTGCAAATTTTTTTCAGTGACTACCCTCCAAA TTTCTCTGAAAAGTCACCTACTTTCGTTTTGCGATCCTTGAAATGAGATTTGACCACACAAGAATGTAACACATGACATCATTTATAAGCTGACCCCACC TAGTGGGAGAAAGGCTTGGTTGGTTGTGGTTGTTGTTGTAAGTGGTATTTTGTTTTTATCATTGGTCATGCTGCACACTTGAACTCCTCTTAAGGCTTAT AAGGAGGGAGCCCTCCCACACTTGAGTGTGCCATTTGAATGACAATACTGTGATGCCCCACAAAAAGAACAGTACACCTTGTGAACCTATGAACTACCGT CTTGTGAAACTCACACTTGTGCTGGTACATACTGTAATTTCTTGTAATATGATGAATACCATGTAGAAGTTAAACTTTCTATGTAATCAAAGCCATTATT CTGTATCCTTGGGCTCTCCGTTTGAATTTACTGATGGTTTTGCCTTGTAACAATCTTAACTTGAAAAATAGACTGGGTTTTTTTATACTTTATTTTCATT ATTTTTTTTTGCAAGATTCTTTTACTTGTTTAATTTGATTGGTGTGATATGGATGTTATATGGTGCAGGCTAAGGAAGCATATTCAAAAGCTGTATACAT TTCTGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACACGGCAAAAAAGGATTAGAAGCATCAACTCATAAAGTTTCTTTGTCGCAGCCATGGAAC TAGTTCTTGTCTGAAATTCTGAATCTTTTTCATTATACTTTGCTCTGACGATAAGGTACACTTCTAACTTCAGAGTTTAGAAAACTTCAATTGTACTACC ATACATCATATAGGTTAGAATTGGAAACTTTTCTCATTGTTGGGTCAAATATTCTCTTAGGTGCTGCTGCTGTTGATTATTATTTGATAGAATGGTTGTT GTCATCAAGCAACAGTTGATTAATGCTTTTAATATTATTTTTCATTTTCAACTGTGTGTAGTTAGTTCCTTGGATTGTTTGACATTTGGGTTCTGTTTTT GTCAAATCGAATACAATCCAGCGTTCCTACCATAAGAATCTGAATTGTACCCAAAAAGAGGTGGCGAGAATCTAAAAAATATGAAGTGATGAAATGCAGG CAATAAATTATACTTCGAGTAATCGAGTTTTCATAGGCTGAGAAACTAGCTAGTTAACCTGTTTGTTACCTGATACTGAACATCTGAACTTTTGGATGGG TCTTATTGTCTCAGGCATTAGGATAAACCAATATATAGAGAAGTAAATGGAAGCTCAAAATAAGATTCTTTTTCTTATCTTCATATGGTTGAATTATGCA TTACTGTGCTATAGCCGTTACTTATTTTCATGGCTGAGGACACTTGCTGTTTTTTTAATCATTTAGAGTCAAGTTTCCAGACTTCAATCAAAAGATTTCA ATTGATTCTTTCGGAGGAACTGCTAATTACTACAGTGAATGATTAGCTTGATGGAAATTTGCAGCCAACTATGTTTTTCATATTTCTTTTTATCAGAGTT GAATTCATCAGGAGTCTATCTCAGATGGTTGATATTCAGATGCTTACTGTACCAGTTCTCTCTTAGTTCCTTTCCAGATCCGTCCATTCACTGATAAAAA CGCTACATATACTTTTTTTGGTTACAATTTGGTGTATCAGGCTCTCTTATTAGCTAGCTGAAACGATAAAAGGTAATCACTTTCATTTGTAATTGTAAGT CAAATTCGTTCCACTATAGATGAGTAGCTGTTATTTGTTAATATTAGAACCTCCCTCTTAGAATCAAATTGTTTAGACCGCAGCTCTTCATGAAGTGGTT AAAATAAAATGGAAGATTATTCATTTTGTTAAAATCGCTACATTTGGTCAATTCCAAGTTTATCTTCATCTGCATCAATAGCTATACCCCAATGTACTCA AAACTAAAGCTATCCTTTGTGGAACTCTGTTTTAGGCAGTATGGTGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_167894; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466410
Blastp | Glycerol-3-phosphate acyltransferase, chloroplastic from Phaseolus with 62.5% of identity |
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Blastx | Glycerol-3-phosphate acyltransferase, chloroplastic from Pisum with 85.71% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421862.1) |
Pfam | Glycerol-3-phosphate acyltransferase N-terminal (PF14829.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |