Ll_transcript_467654

• Id Trinity: TRINITY_DN49274_c2_g3_i2
• Name Transcript: Ll_transcript_467654
• Sequence: ATACATTGAAGGTTTTAAACACCAGAAAGTTCAAAAAATCGAAGTCGCATAATCCTCCTCTCAAACTTCAACGCACTCTTTCTGCTTCGATTTGTATCTT CGATTCAAGGGTTTTCAAGGGTTTAAGCTTAATCTACCTCAAACCCTAATTTTCCCAATTTCTCTCTCGATCTACCACTTCTCTCACAATCTCAACTACC TTACCGATCTTAGATCCAATCAATACCTGCCAACAACAAAAAGTGATTTCGGTTCTTGTGAATGAAGAATAATAATAGTGATTTGGGGAATGAATGTATG TTGTGTTTCCAAGTGATATGAAGTGTTGAATATGAGCAATGGTGGTGGGAAGACTGGAAGACTGCTTGAACAGCCAAGCACGCGGAGGAGGAAAGTGGGT GGTGATGACTTTGCTCAAGCAATTGCGAAAATCGCGGTAGCTCAAGTATGCGAGAATGAGGGTTTTCATGCATTTCAGCAGTCAGCTCTTGAAGTGTTAT CGGATGTCAGTGCTCGGTATATTTTGAACATTGGGAAATCTGCGCATCGCTGTGCTAATCTTGCAGGCAGGGCTGAATGCAATGTCTTTGATGTCATCCA AGGGTTGGAAGACATGGGATCATTACAGGGGTTTACGGGTGCTTCTGATATCGATCATTGCCTTGAAAGTTCTGGCGTTGTAAGGGAAATTGTTCAGTTT GTTAATGAAGCTCAGCCGATCCCATTTGCACACCCTATTCCCCGGTTTCCAATCGTGAAAGAGCGAGTCCTGACTCCAAGTTTTTTACAAAGAGGAGAAG AGCCTCCGGAGGAGCATATTCCAACGTGGTTGCCTGCATTCCCTGTTCCAGAAACACATTCAGAGTCACCTACAAGGAATGGAAAAGGGACAGAGCCCCA TGCTAATAAGGTTGAGCATGAAAGAGAGAACGGTAAGGGGGAGAGGCCTCAGGTGAATTTGCAGCAGCAAATGGTCTCAAATATCTTTGAAAAATCCACT TTGGTTGACCCTGCAGATGCCAAGGCAAAGAGAGTAGCAGTGGAAGGCAACCCATTCCTTGCTGCACCTTTGAAAATCGGGGATAAGGAAGTTGCTTCTG TTGCCCCTCCAGCTAAGCTCTTCAATGTCGTAGCTTTAGATAATCCTGTTGTGGAAAATTTTGTCGAAGATAAATCCATTTCTGTACTGGAGACATTTGC TCCAGCAATTGAAGCAATGAAAAGCACATGCTATGATTCCGAGGAAGATCGGACAAAGATTCTTTTGAATGAGAAGCCTACTGTACGCTTTAAGATTGGT ATGGGAAATAAGTTCTTAGGAAGATCCACGGATTTAAGTCATAAAAAAGACGAGCATCAGAAGACTTTGCCTTGGTTTACAATGGAAGATGAGAAGGATG ACAGGAAAAGGAGGGCTGAGAAAATTCTAAGGGAATCTTTGGAAAACCCAGATCAGCTTGTTCAATTGTAAATTAGATTGTTTTCAAGTTTTGATTATAA TCTGTATACTTTTTCAGGAGAATGTCAAAATAGCTAGCAAGTTCTGGGACAGCGAAATCTAGGTCATTGTTAGATGTGTTAACGCTTTAACAATCGTTCA GTTATTTCAAAAGTTCTATGAAGCATTTTAATGGAGACTATGAAGAACAAATACAGTGGATTGTTCTTAAAGCAAAGATATGAAGTGCCTAGGTGTTGAT GCTAATCTATTGCTTCAAGTTGATAGATCAAACATAAACATGAAGAGGGAATGGGTTATGCTTGATGCTGCTGGTTCTCCTATCCTCACAATGAGTGACA TGGTGGGCTGCAGTGATTAAAATTCAAGACCATATCACGTAATGCGTTTGCAATATTATTACCTTATATACGACACTCTTCACTCTCCGGTACATGTATG AGTACGCGGTGTGTAATATGTTACCTGTCAAATTTTGAGTTTGCTAGGGGTATATTAACAAATACACTAGATAGTTTCAGATATTTTATTTGAAGCTCTA ATATTTTATTTTATTTATTTATTAGTTATATGTGAATTATAAACAAAA
• Tissue: pods
• Gene name: LI_gene_167936;
• Additional information: details;

Expression of Ll_transcript_467654

FPKM

• PAB: 6
• PNAB: 4.7
• PS1: 4.3
• PS2: 4
• PS3: 5.3
• PW1: 4.1
• PW2: 4.3
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467654

• Blastp: Transcription initiation factor TFIID subunit 8 from Arabidopsis with 37.54% of identity
• Blastx: Transcription initiation factor TFIID subunit 8 from Arabidopsis with 36.44% of identity
• Eggnog: TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410ZS4D)
• Kegg: Link to kegg annotations (AT4G34340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443066.1)
• Pfam: Bromodomain associated (PF07524.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;