| Id Trinity | TRINITY_DN49283_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_465822 |
| Sequence | CAAATTTACAAGACTAAACAAAAATTGGAACAATAGAGGCCACAATTCTAACCACTGAGAAAGAAAACGACAGGGGAATGTGGTAACCCCTATTCCCTCA ATGGTTGATTCAGAAGAATCATAGTAATCAGAAATGCAAAGCCAAAAGAAAATGGTGAGAGAGAGACAATTCAGTTATTACTGTTGAAAATGCAAAACAA AAGAAATGAACCTCGTGAATCAATAACATGATGACGTGACCAATCCTACCCCACCTTCCACTACACTACACCCAACATTCATTACCCCACAAAGTTTCAA TCTTTGATTTCATTTTTCTGTTTCACCAACTGGGTCTCTCTTCTTTCTCTCTCAGCAACAAGCAATGGGGAATGTGAATGAAAGAGAACAAGTTTTCAAT GTTAATGTTGCTTCAGAGGTTCAACAAAGCCATGAAGGTGAAGAAGAATGTGAGATTGTTTCACCTTCTCAGTTGTTGATGATGATGGGTCAGGTTCCTT CACCTAGCCCTAGAGTTACACATTCTCCATTCATGTTCACCCCTCAAGTAACTAACTTTCACTTCTTCTCTATCTCTCTTTCACTTTTTCACAATTCAAG GGTAAATGGGTTTTCACTATTTTCAATTTTTTCACTGCCTATTGTAAAAAGTTCAATTTTTTATATATATCTTATTCCCCCTCCTCTCATAAGTGGAGTT TCAAAATTAATAATCAAGAGTCAAACCAAATCCACTTAGGTTTTATTCTTATTGAATCTTATCATGCTTGGATTCCACAAAGTGAGGTCACACTGCATTC ATTTTGGAATCTGAATCTGTGGGCTCAAGCTGCAATTTTTTTATTTTTCTTAAGATATTTATGGACGAACGGTGTTTAATGCAAGTCCACAAGGTACCAG TGGTTCCACTACAAAGACCTGATGAGATGCATGTTCCAAGTCCTCCGTGGATGCAAACTCGTTCCGGGTGTGAAGATATGTTCCGTGAACTAGGAATTCC AACAATGATTACTTGGAGTTATGAAGGGAAAGAGGTAGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGCCCTTGCAGAGATCAGGGAAAGAC TTCACAGTAATGAAGGTTCTGCCATCCGGTGTTTACCAATACAGATTTATTATCGACGGACACTGGAGCTACACTCCAGACTTGCCTTGGGCTCAAGATG ATGCTGGGAATGCTTACAACATTCTGGACTTGCAGGACTACGTTCCTGAAGACATCGGAAGCATTTCTAGTTTTGCACCTCCTCGATCACCAGACTCGAG TTATAACAACTTAGAACTTGGTTCTGAAGATTATGCAAAGGAGCCGCCAATTATTCCTCCACACTTGCAAATGACACTGCTAAATGTGCCTGCAACAGAC ATGGGAATCCAACCTCCTATGTCAAGACCTCAACATGGAGTGCTCAATCATCTTTACATGCAGAAAGGAAAGAACAATCCTTCAGTGGTTGCACTTGGTA CAACCCATCGGTTTCTTGCCAAATATGTTACAGTAGTGTTGTACAAGTCTCTGCAGAGGTAAATATAAATGACATAAACCATAGTCTTTAATGTCTTTTG TTAGTGAATAGATCTTCAAGTACTATAATTATAAGAGAAATGGTAAGATCCATGAGGATGAATACAAGAAAGTCAAGATTGTATCTCATCATATAATGCA ATTGCTTAAGGCCATTTATGAGACAACTTAGTTCTCAATTCTTACATGTTTGGTGATGCTTGTATCTTGGAATTTTGATTGAATGACTGAAAAAAGAAAG AGGGGGCAATGTCTACTAGCTTTACGCATGCATTTATGCTCCTTATGGTGAGCTTATACTGCTTACTTTATCTACCCACGTCTTTGTTTGTCCTAAGTTC AACTAAATAAGCTTTGGAGCATTGCATTTCTTGCCCCGTGTAAACGTAGAGGGCGACTCTTCTATAGTGTTAAGTGTGTTCTTGGACCAAATACTAGTAC TAGGTTTATATGCTTGTGCCCAACCCAATGTTCACTCATGACTATAACTGATTTAATTCTTCATACAATCAATGACGTCTTTAATAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_168032; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465822
| Blastp | SNF1-related protein kinase regulatory subunit beta-2 from Arabidopsis with 72.49% of identity |
|---|---|
| Blastx | SNF1-related protein kinase regulatory subunit beta-2 from Arabidopsis with 72.49% of identity |
| Eggnog | Protein kinase, AMP-activated, beta(ENOG410XRB3) |
| Kegg | Link to kegg annotations (AT4G16360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016197570.1) |
| Pfam | Glycogen recognition site of AMP-activated protein kinase (PF16561.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |