| Id Trinity | TRINITY_DN49285_c1_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_467972 |
| Sequence | TATAATTCTCATTAATCAATTCTGAATTATATCAAACTCATATATATTCAAAACATTTTAGTAAATATTCACTAGTTTATAGGATCAATATTTTTATATG CTAGTTTCAGAATTTGACATCATTTATTTATAAATGAAATTATGTGCAGATATTAGTGCCCTTTTAGCAAAATCTGATGACCCAAAAATGGGTGAGGATC CTTGTGTACTTGAGGTTGTAAGGCAATTGGATAAGGCTTGTACAGAGGCAGGGTTCTTCTATGTGAAAGGCCATGGTATTCCTGAAACTCTTCTCGGAGC GGTTAAAGATATAACTCGCAGATTCTTTGAACTTCCATATGAAGAAAAGGCACAGATCAAGATGACTCCAGCTACTGGATTCAGAGGATATCAGATGATT GGAGAAAATATTACTAAAGGTGTACCTGATATGCATGAAGCTATTGATTGCTATAGGGAAGTGACAAAGGGCATGTATGGTGATCTTGGCAAACAAATGG AAGGATGCAACCAATGGTATGTAGTATTAGCATTTTCCTGTTTAATGCTTGTTGTATTCCTTCACCCCTTCCTCAATTTTCGCTGAATATTATGCTCAAG AGAACAAGTATGCATATGCTTCTAATCCTGAATTTTTGCTTAAGTAAGAAATTCACTTCATTTGGTTGATGATGTAAGGATTAATATTTTTTTGGTAGAA AGATTAAACTTCATTACCATTGCAAAATGTATGCGACAATCAGCCTCAGTTCCACTAGGTGGGGTCGGTTCTCTGCAAAATGTATACACTTAAAGTTAAC TCTTCATAAACCAAAGGAAAAATCAATCTATTGCATATATTTCTATCCTCTGTAGAAATAACTCTAGATAAACAGTAAAGAATTCTATTAGCAATATCTT GAACACCATGGATGTAGTTTTGATTCTCAGACTGGAAATCCTTGAGTTCTGTTCACTCCAAATGTGATAACCAACAGTAGCATCGCCAGCCGATACCACG TTCTATTTTTGCTTCTTACGGCTATTACTTCACAGTAACCAATCTCTCCGGTTGCCCCATCTACGTTTCCAATTGTCAGTTCCCAACCAAATACAGACTT GTTCCAACAGATTTTTTGAACAAGGAACTCCAACAACAAGTGTCTGCATGAGTGAGGTTCTATCCCTTTTTGGTTACCAATCTATCCTGCATGATGATCC ATGATATGAAATTATGCCCAGGCACATTGCTTCTATACCAGATGATTCTAGAGAGTCTGAAATTAGGTTGCATGCCCATAAGCCAGCAATAACCAGATTT GATAGTATAGACTCATTAGAATTTGGTAAGCAAATACTGCTACCAACAGCTTCAGCAGATTTAAATTTCAGTTTATTCCACTTCCTCCAATGCCAAGCAA ATTTAATATTAGTTTTGCTTGATTGGCACACTCTCTGATATATGACTCTCATATCCAAGCATTTGACTAATTGAACTTGCCAGTATTAAAACACGCATTA TGGCGTCATTCGATCCATGTAGCCGACTCCACCTACTGAGATTAAGGCTTGATTGTTTTTGTTTATTGTATGGTCTCTGTGTGGTATAGCTCATCAGTTA GATGTAGAGGGATATGTATTTAGTGAATTACAATTTGGTGACTTTGGTACAGTAAGACCAATCTTGAACATATTTGACCGACCTCGATTGAAGAATGACA TTGATGGATTGACCAATCTTGGTGACAATTGACCACTTGTAAAACAAATTAAATTGAACGACGTCAATTGAGTTCGAGATTGGTCTGACTGCACTTAAGT AACTAAATTGTGAAGTCATTGAATCCAGACCCGAGGTAGAGGGGGACTAATACATATTTTATGGCGTTATTTGATCATGTAACTAACTCCACCCTTCCTA ATCATCGTCGCTAACTTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_168066; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467972
| Blastp | Probable 2-oxoglutarate-dependent dioxygenase At3g50210 from Arabidopsis with 69.92% of identity |
|---|---|
| Blastx | Probable 2-oxoglutarate-dependent dioxygenase At3g50210 from Arabidopsis with 69.92% of identity |
| Eggnog | 2OGFe(II) oxygenase(COG3491) |
| Kegg | Link to kegg annotations (AT3G50210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446812.1) |
| Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |