Id Trinity | TRINITY_DN49285_c1_g3_i7 |
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Name Transcript | Ll_transcript_467955 |
Sequence | TTGGAATGTCCGAAGTTAAATTTCTTTAATAACAATACCACCTAACATTATTTTCACTCAATAACAATATCACACACAACTATTGGAAGCTTTTCATAAT TCACCTATCATCAAGTACACACAAAATCACAACCAGGCAACTATGGCTACGGATTTTAGTTCCATCCCCATAATTAATATTAGTGCCCTTTTAGCAAAAT CTGATGACCCAAAAATGGGTGAGGATCCTTGTGTACTTGAGGTTGTAAGGCAATTGGATAAGGCTTGTACAGAGGCAGGGTTCTTCTATGTGGTACTACT TGTATCTTTCAAAGCTTTTCCTTTTTTTCTCTACCTTGCTTTAGTGAGAATATAAGAAAGGTGAGTCAGGTGGGTTTACCAGGTGAGTGAGATGCTGTTC TCCGGGATTTGAACTCGTGATATCTTTGTTTGCTATGAGGCAACGTTAATGTTGTTTTAGTAAGAATGTCTAGGCTAAAATAATATGAGGATATAGTAGT TCTTCTTAGAAATATTTTTTGGTGTTAACCGAAGTTGTCTCTTATCCTAAGAAACTAATTCATTTCGGGGTACGTGGCTACTTATCCCAACAAATATGGT TCTCGGTATTTAAACTTTGACCTTATATGATACTTGGCGATCAAGGGACCTTAAACCACCAGACTAACTCGAGACAACGTAGTAAGAATCTGCACTACAA TAATGAAGTTAATCTTTCTATATAATCACTTATTTTACACAAGGGATCCATTACAGTTTGTGGTAACATATCTGATTTTTGGAGTTTTGATTCCAGTTAT CTCTAGAACAACATTTCTGTCAATTTGAGACTGGTCCATAACTAATAGCACTTGAAAATTGAAATGATCATTTATAAAAATAAATAAAAAAAGGTTACAT TCATGGCAACTTCTAGTGAAATTATTTGTTACCTAGATTTTTATTAACTAGGGTTCTTCAATTTAACACAAGAAATTAATTAACTACTTTGTCTTTTTTT TATCAGCAAATCAACTACTTTGTCATCTCTTAATGTTACATTTTTATGATCCAAAGAAAGATGTTGCTTTGCAACTTTCTTCCTTGTCATCTTTTATCAT GGAACAGGCCATTATCATGGTTAATGTTTTTTTCAATTCCTACTATCCTTGATTTACAGAAAGGCCATGGTATTCCTGAAACTCTTCTCGGAGCGGTTAA AGATATAACTCGCAGATTCTTTGAACTTCCATATGAAGAAAAGGCACAGATCAAGATGACTCCAGCTACTGGATTCAGAGGATATCAGATGATTGGAGAA AATATTACTAAAGGTGTACCTGATATGCATGAAGCTATTGATTGCTATAGGGAAGTGACAAAGGGCATGTATGGTGATCTTGGCAAACAAATGGAAGGAT GCAACCAATGGTATGTAGTATTAGCATTTTCCTGTTTAATGCTTGTTGTATTCCTTCACCCCTTCCTCAATTTTCGCTGAATATTATGCTCAAGAGAACA AGTATGCATATGCTTCTAATCCTGAATTTTTGCTTAAGTAAGAAATTCACTTCATTTGGTTGATGATGTAAGGATTAATATTTTTTTGGTAGAAAGATTA AACTTCATTACCATTGCAAAATGTATGCGACAATCAGCCTCAGTTCCACTAGGTGGGGTCGGTTCTCTGCAAAATGTATACACTTAAAGTTAACTCTTCA TAAACCAAAGGAAAAATCAATCTATTGCATATATTTCTATCCTCTGTAGAAATAACTCTAGATAAACAGTAAAGAATTCTATTAGCAATATCTTGAACAC CATGGATGTAGTTTTGATTCTCAGACTGGAAATCCTTGAGTTCTGTTCACTCCAAATGTGATAACCAACAGTAGCATCGCCAGCCGATACCACGTTCTAT TTTTGCTTCTTACGGCTATTACTTCACAGTAACCAATCTCTCCGGTTGCCCCATCTACGTTTCCAATTGTCAGTTCCCAACCAAATACAGACTTGTTCCA ACAGATTTTTTGAACAAGGAACTCCAACAACAAGTGTCTGCATGAGTGAGGTTCTATCCCTTTTTGGTTACCAATCTATCCTGCATGATGATCCATGATA TGAAATTATGCCCAGGCACATTGCTTCTATACCAGATGATTCTAGAGAGTCTGAAATTAGGTTGCATGCCCATAAGCCAGCAATAACCAGATTTGATAGT ATAGACTCATTAGAATTTGGTAAGCAAATACTGCTACCAACAGCTTCAGCAGATTTAAATTTCAGTTTATTCCACTTCCTCCAATGCCAAGCAAATTTAA TATTAGTTTTGCTTGATTGGCACACTCTCTGATATATGACTCTCATATCCAAGCATTTGACTAATTGAACTTGCCAGTATTAAAACACGCATTATGGCGT CATTCGATCCATGTAGCCGACTCCACCTACTGAGATTAAGGCTTGATTGTTTTTGTTTATTGTATGGTCTCTGTGTGGTATAGCTCATCAGTTAGATGTA GAGGGATATGTATTTAGTGAATTACAATTTGGTGACTTTGGTACAGTAAGACCAATCTTGAACATATTTGACCGACCTCGATTGAAGAATGACATTGATG GATTGACCAATCTTGGTGACAATTGACCACTTGTAAAACAAATTAAATTGAACGACGTCAATTGAGTTCGAGATTGGTCTGACTGCACTTAAGTAACTAA ATTGTGAAGTCATTGAATCCAGACCCGAGGTAGAGGGGGACTAATACATATTTTATGGCGTTATTTGATCATGTAACTAACTCCACCCTTCCTAATCATC GTCGCTAACTT BLAST |
Tissue | pods |
Gene name | LI_gene_168066; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467955
Blastp | Probable 2-oxoglutarate-dependent dioxygenase At3g50210 from Arabidopsis with 69.88% of identity |
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Blastx | Probable 2-oxoglutarate-dependent dioxygenase At3g50210 from Arabidopsis with 69.88% of identity |
Eggnog | 2OGFe(II) oxygenase(COG3491) |
Kegg | Link to kegg annotations (AT3G50210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446812.1) |
Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |