Ll_transcript_467961

• Id Trinity: TRINITY_DN49285_c1_g3_i8
• Name Transcript: Ll_transcript_467961
• Sequence: TTGGAATGTCCGAAGTTAAATTTCTTTAATAACAATACCACCTAACATTATTTTCACTCAATAACAATATCACACACAACTATTGGAAGCTTTTCATAAT TCACCTATCATCAAGTACACACAAAATCACAACCAGGCAACTATGGCTACGGATTTTAGTTCCATCCCCATAATTAATATTAGTGCCCTTTTAGCAAAAT CTGATGACCCAAAAATGGGTGAGGATCCTTGTGTACTTGAGGTTGTAAGGCAATTGGATAAGGCTTGTACAGAGGCAGGGTTCTTCTATGTGGTACTACT TGTATCTTTCAAAGCTTTTCCTTTTTTTCTCTACCTTGCTTTAGTGAGAATATAAGAAAGGTGAGTCAGGTGGGTTTACCAGGTGAGTGAGATGCTGTTC TCCGGGATTTGAACTCGTGATATCTTTGTTTGCTATGAGGCAACGTTAATGTTGTTTTAGTAAGAATGTCTAGGCTAAAATAATATGAGGATATAGTAGT TCTTCTTAGAAATATTTTTTGGTGTTAACCGAAGTTGTCTCTTATCCTAAGAAACTAATTCATTTCGGGGTACGTGGCTACTTATCCCAACAAATATGGT TCTCGGTATTTAAACTTTGACCTTATATGATACTTGGCGATCAAGGGACCTTAAACCACCAGACTAACTCGAGACAACGTAGTAAGAATCTGCACTACAA TAATGAAGTTAATCTTTCTATATAATCACTTATTTTACACAAGGGATCCATTACAGTTTGTGGTAACATATCTGATTTTTGGAGTTTTGATTCCAGTTAT CTCTAGAACAACATTTCTGTCAATTTGAGACTGGTCCATAACTAATAGCACTTGAAAATTGAAATGATCATTTATAAAAATAAATAAAAAAAGGTTACAT TCATGGCAACTTCTAGTGAAATTATTTGTTACCTAGATTTTTATTAACTAGGGTTCTTCAATTTAACACAAGAAATTAATTAACTACTTTGTCTTTTTTT TATCAGCAAATCAACTACTTTGTCATCTCTTAATGTTACATTTTTATGATCCAAAGAAAGATGTTGCTTTGCAACTTTCTTCCTTGTCATCTTTTATCAT GGAACAGGCCATTATCATGGTTAATGTTTTTTTCAATTCCTACTATCCTTGATTTACAGAAAGGCCATGGTATTCCTGAAACTCTTCTCGGAGCGGTTAA AGATATAACTCGCAGATTCTTTGAACTTCCATATGAAGAAAAGGCACAGATCAAGATGACTCCAGCTACTGGATTCAGAGGATATCAGATGATTGGAGAA AATATTACTAAAGGTGTACCTGATATGCATGAAGCTATTGATTGCTATAGGGAAGTGACAAAGGGCATGTATGGTGATCTTGGCAAACAAATGGAAGGAT GCAACCAATGGCCACAAAATCCTCAAAAGTTCAAAGGTCTTATGGAGGAGTATGTTAGTCTTTGCACAGAGCTTGCAAGGAAAATTATGCGTGGAATTGC TTTAGCATTAGGTGGATCACCAGATGAATTTGAAGGTCAGAGAGCCGGGGATCCCTTTTGGGTAATGCGGCTCATTGGTTACCCAGGTGTATCCACTGTA AATGGAACAAATGTTCAGAAAAATGACATTGGATGTGGACCTCACACTGATTATGGTTTGTTGACATTGCTTAACCAAGCTGATGGTATAAATGCACTAC AGGTGAGAAACAAATCTGGTGATTGGATATCAGCACCACCAGTTCCTGGGTCATTCGTGTGCAACATTGGTGACATGCTAAAGATATACTCTAATGGTTT GTACGAGTCGACTTTGCATCGAGTGATAAACAACTCTCCGAAATATAGAGTCAGCGTCGTATTTTTTTACGAGACAAACTTTGATACTGCAGTAGAGCCA TTGGATACATGGAAAACAAGGGCAAATGGCACTAAGAAGTTTGAAAGAGCAGTGTATGGAGAGCATTTAATTAGCAAGGTCCTCACTAATTTTGTTGAAT AACTTTGTGTTCATTGTTCTATTGTGGAATAAGTTCAGCATCTAGTTAGCAAGCTCTTCGCCTGCATGTTCATACCTACTGGGTACTGAGAATATTGTAA TTGTCACTCAAGTGTTTGTTATCTATCAATGTCTTTCTCAAATTTGCAAGACACCCATTTGTTATATAAACTTATAATAAACTCATAAAATTTACGAG
• Tissue: pods
• Gene name: LI_gene_168066;
• Additional information: details;

Expression of Ll_transcript_467961

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.1
• PS2: 0.1
• PS3: 0
• PW1: 0.3
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467961

• Blastp: Probable 2-oxoglutarate-dependent dioxygenase At3g50210 from Arabidopsis with 70.92% of identity
• Blastx: Probable 2-oxoglutarate-dependent dioxygenase At3g50210 from Arabidopsis with 70.92% of identity
• Eggnog: 2OGFe(II) oxygenase(COG3491)
• Kegg: Link to kegg annotations (AT3G50210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446812.1)
• Pfam: non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;