| Id Trinity | TRINITY_DN49286_c1_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_466359 |
| Sequence | CTTAAAGCCGGTTGTTCTCCGTATTTCTCTCCTACCCTCTCCCCCTCATCCGCACCAATTTTTCAGTATAAATAGCCAAGCAACCCAAACCATTATTTCT CTAAAGCATCCTCTCTACCCAAAACTCAAGCTTATCAAATACCTTCAAAACTCTTCAACATCTTTGTGTGTTTATCTCTTTCATATTCAAGGCAACATCA AAAGCTGCCAAAAATGGTAGTGTTGTCGAAACAAACAACTGAGCGGTATTCCTATATCAGGAACTGCAACAAAACATCTTCATTCTCCTCTACAGGAATT ATTCCTGTGGTGGACCTTTCCAAACCTGAAGCAAAGACTCTGATAGTAAAGGCTTGTGAGGAGTTTGGGTTCTTTAAGGTCATCAACCATGGTGTCCCTA TGGAAGCTATCTCAAAGTTGGAGTCTGAAGCCATCAACTTTTTCTCTCTTCCCAACAATCAAAAAGAAAAAGCAGGCCCACCTAATCCATTTGGTTATGG AAACAAGAAAATTGGTGTAAATGGTGATGTTGGTTGGCTTGAATACCTTCTTCTGAAAAACAACCAAGATTATAACTCTATGAGACTCTCAGTTTTTGGA CAAACTGCAGATAAGTTTAGGAGTGTGTTGAATGATTATATTTGTGCTGTGAGGAAGATGGGTTGTGAGATTCTTGAGTTGATGGCTGAGGGATTGAACA TTGAGGAAAAAAATGTGTTCAGCAAGCTTCTGATGGATAAAGAGAGTGATTCTCTTTTCAGGTTGAACCATTACCCTCCTTGTCCTGAAATGGCTTTGGA TAATAAGAATGGTGAAAACGTTGTTGGGTTTGGTGAGCACACAGACCCACAAATCATTTCCTTGCTCAGGTCCAACAACACTTCAGGTTTACAGATTTGT CTCAAAGATAGGAGTTGGGTTTCTGTGCCTCCTGATTATAACTCTTTCTTCATTAATGTTGGTGATTCTCTTCAGGTTATGACCAATGGGCGGTTCAGGA GTGTGAGACACAGGGTTGTGGCAAATGGGTTTGATTCAAGGCTCTCAATGATTTATTTTGGTGGTCCACCATTAAGTGAGAAAATAGCACCATTGCCTTG TCTCATGAAAGAAAAGGAGGAAAGCTTATACAAAGAGTTTACATGGTTTGAGTACAAGAAATCAGCTTATGCTACAAGATTGGCAGACAATAGGCTTGGC CACTTTGAGATATTTTCAGCATCATAAAGCTACAACAATATTATGGGAGCACATGTCAACTAGATCAATGTAATATATACTATAACATATGGTTTTTAAT GTATATACTAGAAGTGGGTTTTTATTTTTCATTTGCTTTGGTATGAAATTGTCTATCAATCAGAATCAGTGATAGGTAGGATACTATGTATAAAAACTCC CTTTCCTTGTGCTTTAATATGTAAGTGCTTTTTTTAGTAAATGACATGTGTTTTCTGTCAGCAATGAATGAAACCTATTGTTATTATTTTTCATGTTCAG AAAAACTTAAGAACCGTCAATATGTTGTGGATTAGAACATCTCTATTCTCTCGTGAGTTCATTTCCGAGGGAAGGGACCATCCTTGAGTCCTAAGGAACT AGTCTGTGAAACCCGTGGGTCTTGTTGCACTAAGCCCAAAAATACAACCTGGAACAAGAGGGACTTCACGCAATCATTAGTGGTCCATAATAAGCTTTCA CTATAATTTCTTCTAATATTTAATAGAAAATGAGTTGGTGTGGTACTTTTATGTTTTCTGTTACAGGTCATACTCATCTCTAGCCTCTAGGGGACTGTTG TCTTTCCTCGATAATATTATCTTAGTAAGATAAATATATATGGGGTAGAAGTGTTATTGTATATAACTTTTTCTTTGTTTTTTGACATCACTTTTATCTT CAATAATTGAAAGGACTTTCTTTCATCATTTACACCTTTCATATAGGAATTATTCTCCTTTATGGCTCTTGGGTATTGTAAGTGTAGCTCACAAATATTG TATAAGGTCAAATGGTTCTATCACTAAACCAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_168077; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_466359
| Blastp | Gibberellin 2-beta-dioxygenase 1 from Pisum with 72.7% of identity |
|---|---|
| Blastx | Gibberellin 2-beta-dioxygenase 1 from Pisum with 72.7% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449246.1) |
| Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |