| Id Trinity | TRINITY_DN49295_c3_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_468141 |
| Sequence | CATCACTTCACATAAAACCCTATTTTCTTTGTTTTTCTATTACAAACACTAATACTCATGTCTACCACCGACGCCGAACACCGCGAAGAGGAAGATGTTC CCGCCGGCGATGACGAAGACACCGGAGCTCAAGTCGCTCCGATCGTTAAGCTCGAAGAAGTTGCCGTCTCCACCGGCGAAGAGGACGAAGATTCTATTCT CGATCTGAAAGCCAAGCTTTACCGTTTCGACAAGGATGGGAATCAATGGAAGGAGCGAGGTGCGGGAACAGTGAAGTTCCTGAAGCACAAGGTTAGTGGA AAAGTTAGGCTTCTTGTGAGGCAATCGAAGACACTCAAGATCTGTGCCAATCATCTCATTCTACCTTCAATGACTGTGCAAGAGCATGCTGGGAATGAAA AATCTTGTGTTTGGCATGCTAGAGACTTTGCTGATGGTGAATTGAAGGATGAGCTTTTCTGCATTCGATTTCAGTCAATTGAGAATGCCAAGAAGTTCAT AGAATCATTCCAAGAAGTTGCTGAATCCCAGAACCCAGCAGAGGAAAGCAAAGATGCATCTGCTGCTGCTGGTCTCCTTGAGAATTTGAGTGTTGAAGGA AACAATGATGCAGACAAGAAAGATGAAGAGAAGTCTGATAACAAAACTGCAGAAGAAGAATCTTCATCAGGAAAGGAAAGCAAGGCAGATACAGAGAAGA AATCTGAAGAGCCTGCTTCCTCTGCTTGAGCATAATATCTATTCATATTTCCTTGCTATGCAATGTGCAAGTTTGGATGGTTGACCATTTTGTTGCCTTT TCTTGGGATATTGTCTCCTACTTGTAGTCTTCAGATTGTGTCACAGTGATGCTACCGAGCGGTATGTGTTCTCTGTCGAGTCTTTTTGTCATCATGCAAT GTTTGAGTCAGGTTTGAATTATTGAGGGTCGGTGCTGTCTGAGTCTTGAGTTTACTAGTGTTATTTTCATTCTATATGTGTATTTCATTACAAGTAAAAT GAGTCTGGATGATGTTGGGATTTTGGGAATGTGCAGTCAGAAAATATTAATAGAGTTTATAAGCACAAAGGTTTTGGATACAATTTGAGTTTCACATTTT TAAAGAGTCAAATTACATGAATTTATTTTTCTTTTACGTCCTCTATTCTATTGTCTTCTTTTCACAAGGTTTCTGTTACCACATTTTTGTCCTTGATCAA GCACCTAACCATCACAAGTGAAATATCAAAACAATATCAGAAGTATATGCATTTTCTTCAATGCACCTGTAGTTGTGTTGCACCAAAGCACCATTATGAG TTCCCATTACTACCATTCCCTACCCCATAATACCTGTTTTTCACCAAATCCCATGGCAAATAATCCCTATGGCTCCTCCACCCAACTTGTCACTTCAGAT CCAAGCCCTCCAATTCCCTCCATTATGGTTCTATTTTCCGATTCTTAGCCAATTTTGAGATGCTATTCAGAGGCTACTCCCGGAGGCTCATGAAGCTTAT GAACTATTCAATTTTGGATCTTGTGAGGGTGGCAATGGGGTGAAGGGTGGCCTTGTGGGTGGTAGTTTTCGACGTCTACGGGTGAGGGAAGGGGTAGGTT GTCGTGGCGCGAAGGGTGTTTTATCCTAAATGGCCACAATGAGGTGGTGTATCAATGAATCAAATCTACCTTGTACAAGTGAATCACATTCAGAGGCATC AAAATAGACAATTTTGATAACAGGTAGAATGTATGATTATGATATTTTAAAAATTGATTCTTACAAGAAAACAATTCTAGACCGGGAGAGAAGTTGCAAT CACTTATCAACCTGTAACTAAACACAAGGGCTTTTGATTTTATATGAACGGACTCCTAAGTATCAGTGTTATAGTTGTAATAATAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_168138; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468141
| Blastp | Ran-binding protein 1 homolog b from Arabidopsis with 68.66% of identity |
|---|---|
| Blastx | Ran-binding protein 1 homolog b from Arabidopsis with 72.4% of identity |
| Eggnog | ran binding protein(COG5171) |
| Kegg | Link to kegg annotations (AT2G30060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413072.1) |
| Pfam | RanBP1 domain (PF00638.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |