| Id Trinity | TRINITY_DN49295_c3_g5_i4 |
|---|---|
| Name Transcript | Ll_transcript_468149 |
| Sequence | TTTGTTGGCTGAAATTTAGGGTTTGTTGTTGCTTGATTTGAATGCAGGAAAGCCAAGCTTTACCGTTTCGACAAGGACGGGAATCAATGGAAGGAGCGAG GTGCGGGAACAGTGAAGTTCCTGAAGCACAAGGTTAGTGGAAAAGTTAGGCTTCTTGTGAGGCAATCGAAGACACTCAAGATCTGTGCCAATCATCTCAT TCTACCTTCAATGACTGTGCAAGAGCATGCTGGGAATGAAAAATCTTGTGTTTGGCATGCTAGAGACTTTGCTGATGGTGAATTGAAGGATGAGCTTTTC TGCATTCGATTTCAGTCAATTGAGAATGCCAAGAAGTTCATAGAATCATTCCAAGAAGTTGCTGAATCCCAGAACCCAGCAGAGGAAAGCAAAGATGCAT CTGCTGCTGCTGGTCTCCTTGAGAATTTGAGTGTTGAAGGAAACAATGATGCAGACAAGAAAGATGAAGAGAAGTCTGATAACAAAACTGCAGAAGAAGA ATCTTCATCAGGAAAGGAAAGCAAGGCAGATACAGAGAAGAAATCTGAAGAGCCTGCTTCCTCTGCTTGAGCATAATATCTATTCATATTTCCTTGCTAT GCAATGTGCAAGTTTGGATGGTTGACCATTTTGTTGCCTTTTCTTGGGATATTGTCTCCTACTTGTAGTCTTCAGATTGTGTCACAGTGATGCTACCGAG CGGTATGTGTTCTCTGTCGAGTCTTTTTGTCATCATGCAATGTTTGAGTCAGGTTTGAATTATTGAGGGTCGGTGCTGTCTGAGTCTTGAGTTTACTAGT GTTATTTTCATTCTATATGTGTATTTCATTACAAGTAAAATGAGTCTGGATGATGTTGGGATTTTGGGAATGTGCAGTCAGAAAATATTAATAGAGTTTA TAAGCACAAAGGTTTTGGATACAATTTGAGTTTCACATTTTTAAAGAGTCAAATTACATGAATTTATTTTTCTTTTACGTCCTCTATTCTATTGTCTTCT TTTCACAAGGTTTCTGTTACCACATTTTTGTCCTTGATCAAGCACCTAACCATCACAAGTGAAATATCAAAACAATATCAGAAGTATATGCATTTTCTTC AATGCACCTGTAGTTGTGTTGCACCAAAGCACCATTATGAGTTCCCATTACTACCATTCCCTACCCCATAATACCTGTTTTTCACCAAATCCCATGGCAA ATAATCCCTATGGCTCCTCCACCCAACTTGTCACTTCAGATCCAAGCCCTCCAATTCCCTCCATTATGGTTCTATTTTCCGATTCTTAGCCAATTTTGAG ATGCTATTCAGAGGCTACTCCCGGAGGCTCATGAAGCTTATGAACTATTCAATTTTGGATCTTGTGAGGGTGGCAATGGGGTGAAGGGTGGCCTTGTGGG TGGTAGTTTTCGACGTCTACGGGTGAGTGAAGGGTGGCCTTGTGGGTGGTAGTTTTCGACGTCTACGGGTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_168138; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468149
| Blastp | Ran-binding protein 1 homolog c from Arabidopsis with 70.51% of identity |
|---|---|
| Blastx | Ran-binding protein 1 homolog c from Arabidopsis with 74.24% of identity |
| Eggnog | ran binding protein(COG5171) |
| Kegg | Link to kegg annotations (AT5G58590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413072.1) |
| Pfam | RanBP1 domain (PF00638.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |