Ll_transcript_467925

• Id Trinity: TRINITY_DN49298_c4_g3_i1
• Name Transcript: Ll_transcript_467925
• Sequence: AGCAAATAACCGGTTTGGCCAAACAGATGGTAACGACATTTGGAATGTCTGATATTGGTCCTTGGTCACTTATGGATACCTCAGCTCAAAGTGGAGATGT TTTCATGAGAATGATGGCCAGAAATTCGATGTCAGAAAAGCTTGCTAAAGACATAGATGCTGCAATTAAGAGGCTCTCCGACGAAGCATATGAAATTGCG TTGCGCCATATAAAGAACAACCGTGAGGCAATTGATAAGATTGTGGAAGTCCTACTGGAGAAGGAGACCATGAGCGGAGATGAATTTCGCACGCTCCTGT CGGAGTTTGCCGAAATTCCAGCTGAAAATCAGGTCCCTCCTTCAACTCCTTCACCAGTTGCTGTTTGAATAGGCTATGTGCTACTGCAATGTAGTGTAGC TATCTTCATACTATTTTTTTCTGAAATAGTACAATATTGTAAGAGAATAAAGTATCTCATTGCAGGAGGAGATAAATTATCTCCTTAAATTCATTTATTG TTTGACATGTGTCTTAATTTGCTTTTTATAATATATTTTAAAATGAAAATTCATAGAGAGAAGAGAAATCAAACACATGTCAAACATTAAATGGATTTA
• Tissue: pods
• Gene name: LI_gene_168157;
• Additional information: details;

Expression of Ll_transcript_467925

FPKM

• PAB: 1.4
• PNAB: 2
• PS1: 1.4
• PS2: 0.8
• PS3: 0.7
• PW1: 1.4
• PW2: 1.8
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467925

• Blastp: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic from Oryza sativa with 83.78% of identity
• Blastx: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic from Oryza sativa with 83.64% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (4341796)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418270.1)
• Pfam: Peptidase family M41 (PF01434.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;