Ll_transcript_484540

• Id Trinity: TRINITY_DN49301_c0_g2_i3
• Name Transcript: Ll_transcript_484540
• Sequence: ATCCTACTTCACTCTCTCTCTCACTCTCTACTTTTCTTCCCTTTTTCTATTTCAATTCCAATTCCAATTCAAATTCAAATTCCTACTTGTTTTCCTTCTT AGGGTTAAGGGCACTATAAACCTTGCAATTATCGAACATGGCTGCCACCGTTGCTTCCAGATGTTCTCATCGTACGTTTTTTTTTTCTTTTTTTTTTTTG CCGTTTAATTTATGGTATCATGCAATTTTTTAATTGTCAAACTAATTTTGCAGCTTATATTTTAAAAAGATTTATTTTTGCTTTGTATTAGTTTAGAGTG ATGGTATTATAGTTATATGGTTGTTGAAAATGTTGGTAAATCGCTTTTCATAACACTTGATTTTTACTGGAGATACTTTTATGCAGAGAAATTGATGCAA TTATGGGACTATTATTTATCTCTCACATTATTCTTTGCATAGCATTGTGTGAGCCTCATGCATTAGGTCTAGAATTGCAACTTTACTTGTGTTAAGAGTA TTGCAAATTTATCTGTGTTAAGTGAATTGCACCCACCCCTCTTCTATTTTTTTGCTTGTAGTCTGAATTTTCTTGCCATTTATCTTTATCCGAAGAGTTG TTGTCTCGAATATTTGAGACAGTAGTGGTCTGATTTTGGTCTTCATCAATTTTACATGTTGAAATTCAGCAGCCTTGTCTCAGGTTTTTCGTTTCCATTA GTGTTTTGGCTAGTTCTTCTTGCACTTTTTATCATCGCATACCCTTTACGGGTTTGACAAGACATGGGTTTCCGTTCGTACTCAACCTTTTGGTCTATTA GGATGTTCTCCTCATTCTCAAACCTAATGGTGTCCGGCAGTGAATCATTCATTTGCATCTCTATTATTACTCAACTTTATGGCCTATTAGCATATGAAAT TCTTTCTTTTGACGTAGTTGACTGATCAGCTTCATGGAGATGCCTAAAGTAGAGGTACTCCAGTGTTACACTATCTTGAGTTCTTTATATATGCACTCAT AGTTCAAAACATGGATACACCCCCTATCATTTTTATTGTAATTAAAAATGAAGGGAATATGTCTTTTCTTGTATTCATTTCATGATTACACATTAGCTGA TATTTGCATGGTCAATTAATTACTGCATTTGGTTTCATGTGTTGTAAAAACATAGTTGGTCGTTCTCTTTTTGGTGGATTAAGGAACAGCGTCCCTGGTT TACTTACAACATCACACGAGTTGACATGTAGCAATTTCTTATCCCAGGTCAGTGTATGAATGAAGGGCAATGTCATGGTTGTGATATTATCAGTGATATT TTCCTTCACAGCTTATCAGCTTATTTATTTCATTTTCCCCCACCTTTGTCAAACTTAGTAGCAACCTGAAGTTGTAGATAACAGAGGTATCAAAGTGAGC CAACAAGGGTGATTCAAGTTGGCTCACTTTGACAGCTTCTTTGTCAGTAAGTATTCCTTAATGATAATATGATCAGCCACACGTTATCTTAAATATGTTA GAAATCCATTCTTCCACCATCTTTCTTGATTATTGTTTTCTTATGAAAAATATTTCTTTCCATGCCTTTTAGCAGCAGCAGCGCACCTTCATACAGATGC GGACTGTCCTCAAGGTTGTTGATAATTCAGGGGCTAAGAAAGTGATGTGCATTCAAGCTTTGAAGGGAAAGAAAGGGGCAAGATTAGGTGACACAATAAT AGCATCAGTGAAGGAAGCCCATCCTAATGGTAAAGTAAAGAAAGGAAAGGTTGTGTATGGAGTGGTAGTAAGAGCAGCTATGCAAAAGGGGAGATGTGAT GGCAGTGAGGTTAAGTTTGATGACAATGCTGTTGTTCTTGTTGACAAGCAAGGTCAGCCTATTGGGACCAGAGTTTTTGGGCCAGTGCCACATGAGCTCA GGCAAAAGAAGCATGTCAAAATTCTTACTTTAGCAGGGCACATTGCTTAAAGGAACAAGGGCAATCCTTAAAATTTATCTTGGAATCCACTGTTTACTTC TACCAGTTCAATAATTGGGATATTTGTTTCATTGATTGTGTTTTTTGTTAAAATTTAACATTGGTGTTCACAAACTTAGTTCTTTAGTACAACTCAAGCT CTCACATTCGTATTCAAAAGAAAATTGTTGGTTGGTCACAAATTCCATCCAGCATCCATATGTTGATATCATATTGTAATGTGAATGCCAACGGGCGTTG GTTCAAGAAGTATATGTTTAATTCCCTTTAAGCAAGGTCTCGAGTTCAATCCCTGTGGATGGAAAAATTGCCTTAAAAGGATAAAAATGTC
• Tissue: pods
• Gene name: LI_gene_168198;
• Additional information: details;

Expression of Ll_transcript_484540

FPKM

• PAB: 0
• PNAB: 1.1
• PS1: 1
• PS2: 0.8
• PS3: 0.9
• PW1: 0.5
• PW2: 0.8
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484540

• Blastp: 50S ribosomal protein HLP, mitochondrial from Arabidopsis with 82.26% of identity
• Blastx: 50S ribosomal protein HLP, mitochondrial from Arabidopsis with 78.87% of identity
• Eggnog: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity)(COG0093)
• Kegg: Link to kegg annotations (AT5G46160)
• CantataDB: Link to cantataDB annotations (CNT0002621)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_006586067.1)
• Pfam: Ribosomal protein L14p/L23e (PF00238.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;