Id Trinity | TRINITY_DN49311_c4_g1_i1 |
---|---|
Name Transcript | Ll_transcript_483599 |
Sequence | TTGATGCGGAGAAGGACGAGGATATTGATGCGGAGAAGGACGAGGATGTTGATGCGGAGAAGGACGAGGATGTTGATGCGGAGAAGGACGAGGATGTTGA TGCAGAGAAGGACGAGGAGGATGTTGATGCGGAGAAAGAAGATGAAGAGGATGATGAAGAAGCAGAGGAAGATGAAATTCAGGAGGGTGAAAGCAATTCA AAAACACCGAAGAGCGAAAAATTGGAGAAAAAAGGTGGACAGGAAAAGGATCCAGTTACTCCTGTTAGTGATAGGCCAACAAGGGAGAGGAAAATGGTGG AAAGGTACTCTATTCCGTCGCCTTCCAAGTCTAGAAGGTCCTCATCCAGCAAAGCTTTACCAATTGAGAAGGGTCATGGTACACAGCTTAAGGATATCCC TAATGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAACCTGCATACGCTTCATAATATACTGTTTGGGAAGAAGACAAAGGCACACAATCTGAAG AGAAATATAGGGCAATTTTCTGGTTATGTGTGGGTTGAAAATGAGGAAAAACAAAGGGCCAAGATAAAGGAGAGGATCGATAAATGTGTGAAAGAAAAGT TGGTAGACTTCTGTGATGTTCTTAATATTCCAATAAACAAAGGCAATGTGAAGAAGGAGGAACTGTCTTCAAAGTTGTTGGAATATTTGGAGTCCCCACA TGCTACAACTGACGTTCTGCTCGCTGAGAAAGAACAGGTTTATTATTCTGAATTTTGATATATTAGTTCGGATCAATTGACAGTTTTGAGTTGCGAGCCA AATCGTAAATAACCTACACCTTGGAATAGCATTTCGTTGGCCCTTTTGACTTGAAGCACCCTGATAGGAGCTGCACCAGAATAGAGGCAGCATGTAGTAT TATTGGTAGAAATCACTTTCAAGTACACTATTTCTCTAGATATTCAAGATGCCTAGAACTCTCCCTCACTTCCCCCTCCTTTCCAATACAAATGATACCC CTCCTTTTACATTCTACCACTTCATAACATGTTAACTATTTAACAAACTAAAAGTTTCACTAGCAAAGCTTAACTAACAGAGGCTGGCCCACTGGGCCCT GCTAGATCTGTTACTAACACATCAACACTGATCATCCTTGTTTTATTTGTTATTTTGAAATTGTCTTATACTCAACCCAAATACATAAAAGTTAACAAAT TATGTAATTTTCAAACATAAGAGAAAATCAACCCCACGTGTGAAGAATCGATTCTTCAATATCCTTCACGTATCTGTATCTGATACTGATACTCTCCAAC ACTTCATCGATATGTATCCATACAGTATCAAAGTTATTTTTTTGAAAAACAAACCAATTATAAATCTGATACTTTCCTTATATCTTCTGATACTCTTAAA ATAATTTTCTGATGCCTCCCAGACACCCAAACTACCATGAGAGCATTTTAAAAAGGAAGAGAAGATAGAAAAGCATAAAACACAATCAATTAAGTAAAAG AGAAAAAAGCATAACATTCAATCTACCAAGTGGAATGGTAGTGAGAGAAAAAAGTCAAAACATGTGTATTGCATAGAGAAGGTAGAAGAAATACATTTGC ATAATGTTGATCATGGACTAAACAGGATCAACACTATTCCTATTTGTGGTCACTAAGCAATGCTTTTTGACAATATGATTTTCATTTTTATTTGGTGATT TCTAAGAAATATGTTCGTTACTTGGAATTTTAGAACAACAATTATATGTTTATTATGTTTTATGAATTATATGCATATTCCAAACTTATTGTATCCCGCA TTTTCAAGAATATACGCATCGATGTATCAGATATGGTATCAGATGCGTATTATATTTGATACTTTTAAGGGAATAGTGTTGATGCGTATTATATCAGATG AGTCAATAGTTGGTTCAAAGAAACTTTAAGGGAACTATAAATTATAGGTTGTGGGGCAGCACAAACGTAAATTTATTCTATAAAAAATTTAACATATTTT TATATAAATATGTTAATTACTGATGTGTCTTAAGGACTACTCAATCGTTACAAAATGTAAAATACATATAAAAATCTCATAATAGTATTCTATATCACAT TAATGAATGTGGTAAAAGTTATTGCTTTGTAGTAGACTTTGGAAATGATATAGATAAAATAAAGTTTTTATAATTTTTAAATTTTGAATACATTTTATAA CTAATTTATTCTTACATCTGGGACAAAAGTCTAAAATATATTGTGATATATAAATATGAAGAGTTTGTTGGGGCAATTGCCCCCATTTTGGACCTCCTGG GTCAGTCCCTGGAAACTTACATTACATAATGGTAATATATGTGTTTCTTGTATTGGTTTTTATAATCCTTAACATTGTATAGAGATAATGCTTTATTTGT TTAGGATTTTTATTTTAGCGTGCTTAGTTTTTTGAAGCTTGCTTCCATATTAACAGAAAGGTAAAAAGCGAACCAGAAAGGTAACTCCTAATAAATCATC TGGGGAAGCATCTACAGAAGCATCTGCCAAGAAGCAAAAGCAAACTTCACAATTTGGGAAAAAGCGAAAGCAGTCTTCTGACCATGAGGAAGATGGCAAA GCTGAACTTGAACTTTCAGATGCAAAAGATGAGTCTCAGGAAGATGAAGATGTTGCTGCAGTGCCAAATAATGTAAGTGATGATGATGGAAGTAAATCAG AGGAAGTGGCAGATAAACCAAAAGCTCGTAAGCGCGCTCCCAAAAAGATTGTGAAGGAGGGTTCAGTTGCCAAAGCTGAAGAGAGAACCCCATCTGTCAA GACCTCTGTGAAGGCTTCCAAAAGCAATGAAAAAACTCCAAAAAAATCAAGTTCAAAAAAGACTGTTTCTGACCATGGCAGTGCTTCTACCTCCTCCAAG TCAAAGCAGATTGAGCCTGCATCCAAGAAACAGAAAACTGTGAAGGAAAAGCAGGACACTAAGGGGAAGGTTGCAAGAAAAAAACAAACAGACAAACCCT CAAAGGCTTTGGTTAAGGATCAAGGAAAAGATAAAAGTAGTAAGAAGACCAAGGTAGCAGAACCTAGTAGGGAGGAAATGCACACAGTAGTTGTTGATAT TCTGAAGGAAGTAGATTTCAATACTGCAACTTTGTCTGATATCCTCAGGCAACTTGGCACCCACTTTGACCTTGATTTAATGCATAGGAAAGCAGAGGTG AAGGATATAATTACA BLAST |
Tissue | pods |
Gene name | LI_gene_168295; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_483599
Blastp | Protein DEK from Mus with 32.19% of identity |
---|---|
Blastx | Protein DEK from Mus with 34.48% of identity |
Eggnog | DEK oncogene(ENOG410XTJA) |
Kegg | Link to kegg annotations (110052) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429358.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |