| Id Trinity | TRINITY_DN49315_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_485075 |
| Sequence | CTCTTCTTCATTTGACACTAACATCAAAGTGTGTGTGATGTTAGACATCAACCTTTTCAGAGAAGAAAAGGGTCACGACCCTGAAATCATTCGCAATTCC CAACGCACTCGTTTTTCTACTGTCCAAGTAGTCGATGATGTTATCAATCTCGACAAACAATGGCGAACACGTCAATTTGAGCTTGAGAATCTTAAAAGAG ACTTCAACAAGATCAATAAGGAAATCTCCAAACTCAAGCGTGGTGGTGAAGATGCATCTAAGTTCATTGGTGAATCAGAAGAGACTAAGAAACTTATAGC ACAGAAAGAGGTTGAAGTTAGGGAAACATTCACACTTTTGAATTCCAAATTGGAAACTATTGGAAACCTTGTCCACCATTCTGTTCCAATCAGTGATGAT GAGGCTAACAATAAAGTGGTGAAATCATGGGGGGAGAAAAGAGTGGAACCTAAACTAAAGAATCACGTGGATCTAGTTGAGCTCCTAGGGATTGCAGATA CAAAGAAAGGAGCTGATGTAGCTGGAGGTAGAGGTTTCTATCTCAAAGGAGATGGTGTTCGTCTTAACCAGGCTCTAATCAACTTTGGACTTGATTTTCT GGAGAAAAGGGGATATACTTTACTGCATACTCCTTTCTTCATGAGAAAAGATATAATGTCAAAGTGTGCTCAATTAGCTCAATTCGATGAAGAGCTTTAT AAGGTAACTGGTGAAGGGGATGACAAATATCTGATTGCAACAGCAGAGCAGCCCCTTTGTGCATATCATATAGATGATTGGATCCACCCTACCCGGCTAC CTATAAGATATGCTGGGTATTCGTCATGCTTTCGTAAAGAAGCTGGATCTCACGGTCGAGATACTCTAGGAATATTCCGTGTTCACCAATTTGAGAAAGT GGAGCAGTTTTGCCTTACTAGCCCAAATGATAATGACTCATGGGATATGCACGAGGAAATGCTGAAGAACTCTGAGGAATTTTACCAAGCATTAAACATT CCATATCAAGTTGTTTCCATTGTATCTGGTGCTTTGAACGATGCTGCGGCAAAGAAGTATGATCTAGAAGCATGGTTTCCATCTTCTAAAGCTTACAGAG AGCTAGTGTCCTGTTCAAACTGTACAGACTATCAAGCCAGAAGATTACAAGTTCGATATGGACAGAAGAAGAGCAATGATCAGGTGAAGCAATATGTTCA CATGTTGAACTCGACTTTAACCGCTACTGAGAGAACCATTTGCTGCATACTAGAGAACTACCAGAAGGAGGATGGTGTAGAAATACCAGAAGTCCTCAAA CCATTCATGGGTGGAAAGACTTTCCTACCTTTCAAGAACCAACCGGTTAACGAAGCGAAATGGAAGAAATCAAAGGCCTGATTGCTTTATTTTTAGTTGA GTGATATTTGTGAAGAGCCAGTCCAGAAGTTTAGATATTTATCGAAATTTACACGACATGGGAAAAAATCCTTAGTGATATAGACTATACTTTTAATGAC TATTTGGTCTTAAGTGTTGCGAAGGGTTTGTATAGTTGGCATTTTCTGCAATTCACTAATCTACAGCAAGTTTAAGTTTGATACTTGTATATGCATAATG AGAAATTTGGAATAAGGTTCTTCCAAAGTGAGTTTATCTGGTAAGTGAGCAAGTATTGATCTTTGGATCATTTGGCTGGTTGAAATGTTAGACTTTATTA AATCAATGGTTGATATAACTTTCTCACTTTATGGAGTTGTCAGGCATCATTGAAATGTTTGATAATTCACATTGGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_168323; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485075
| Blastp | Serine--tRNA ligase from Helianthus with 78.94% of identity |
|---|---|
| Blastx | Serine--tRNA ligase, cytoplasmic from Arabidopsis with 75.39% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452252.1) |
| Pfam | Seryl-tRNA synthetase N-terminal domain (PF02403.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |